Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1564 ATGCAGGCTGAAAATCTTGCTGACTTCTATGAATACTGCAAAGGCTTAGACCTGGCTAGGAATTTCCAATTTCCAACACTAAGACAGCCACCTCCCTCTTTCCTTGCAACAATGGAAGAATACATTAAAGAAGCACCTCAGACAGGCTCAGTTAACAAGAGATTGGAGTATCAGGAAAATGATCAATCACCTACTTCAGAAGAATCATCTCCCAAAGAAGTAGAAAAACCTCAAGACAATGAGCAACAAACTGAAGAAGAAGAAGAAGAAGATGATGATGAAGAGGAAGTAACAGTAGCAGAGGAAGAAGCACAGCCAAAGGAAGTGGAAGCTGAACTCCCTCCTTTGATATCAACTGATACAGTTGATTTTCTGGGTCTTAATGAAATTAATCCAAAAGCTCTAGAACTGGAAGACAAAAATGCTTTAGCACTTGCAATTGTACCACCTGGTGGAAATAATAATCCAAACAATCTTGCTTTGACTAACATTGATGGGACTAGTGGTTGGGAACTTGCATTGGTTGCAACACCAAGTAATCATACAAGCCAAGCACCTGACCGCAAATTGGGTGGTGGTTTTGACAAGCTATTACTAGATAGTTTGTATGAAGATGACACTGCAAGGAGACAACTTCAACTCCAAAATGCAGGTTATGGACATGGAGGAATTCCTATACAGAATAACCCATTTGATCAATATAATCAGCATGATCCATTTGCAGTGTCCAACAACATAGCACCTCCACCCAATGTTCAAATGGCATTAATGTCTCAGCAACAAATGATCTTCCAACAACAGCAACAGCAGCAGCAACAGAATCCAATGATGTTCCAACAACAACAACACAACATGATGATGGTCCCTCACCAGCAACAACAACCACATATTCAACAATATCCTCCTCAACAAATGCAAATGATGGGCTCTCATAATCCATTTGGAGACCCTTTATCAGTACCTAGCTATCCTCATAGTTCCATGCCCCCACAGGGGAATTACAATTTAATCTAG 1014 0.4053 MQAENLADFYEYCKGLDLARNFQFPTLRQPPPSFLATMEEYIKEAPQTGSVNKRLEYQENDQSPTSEESSPKEVEKPQDNEQQTEEEEEEDDDEEEVTVAEEEAQPKEVEAELPPLISTDTVDFLGLNEINPKALELEDKNALALAIVPPGGNNNPNNLALTNIDGTSGWELALVATPSNHTSQAPDRKLGGGFDKLLLDSLYEDDTARRQLQLQNAGYGHGGIPIQNNPFDQYNQHDPFAVSNNIAPPPNVQMALMSQQQMIFQQQQQQQQQNPMMFQQQQHNMMMVPHQQQQPHIQQYPPQQMQMMGSHNPFGDPLSVPSYPHSSMPPQGNYNLI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1564 337 Coils Coil 83 103 - -
Lal4g1564 337 MobiDBLite consensus disorder prediction 80 101 - -
Lal4g1564 337 SUPERFAMILY GAT-like domain 2 44 - -
Lal4g1564 337 Pfam ANTH domain 2 44 IPR011417 GO:0005543
Lal4g1564 337 MobiDBLite consensus disorder prediction 51 65 - -
Lal4g1564 337 MobiDBLite consensus disorder prediction 38 115 - -
Lal4g1564 337 PANTHER CLATHRIN ASSEMBLY PROTEIN 2 324 IPR045192 GO:0048268|GO:0072583
Lal4g1564 337 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 2 324 - -
Lal4g1564 337 Gene3D ANTH domain 1 47 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1564 Lal-Chr4 19832406 19834928 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1564 K20044 - gmx:100783084 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1559 17 17046989 17052363 Lal4g1564 4 19832406 19834928 LSH
Lal7g1101 7 16994263 16998935 Lal4g1564 4 19832406 19834928 PCT
Lal4g1564 4 19832406 19834928 Lal7g1101 7 16994263 16998935 PCT