Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1072 ATGGCGAGGATGCTTCGCAACGCTTTCCTTCTCAAACGTTCTCTTTTCCCCCATCAGATTTTAGGAAGCCAAGTTCTTGTCAAGGTTGTGAAGAATAAGCTTGCCCCTCCATTTAAAACTGCTCAGTTTGAGCTTGAGTTTGGCAAGGGTATATGTAGAGAAGCAGAGATCATAAAATTGAGCTTAAAATACAAACTCATCTTAAAGGCTGGTTCAATGTATTATTATAATCATCAGAGTTTCCGCGGTAAGGATGCTCTTAAGAATTTCCTGTCGGATGATCATAGCACATTAGAAGAGCTTGAAATGAAGCTCAGGGAGAAGCTTCTTAATGCCGAGACAGAAAAGGTAACTAAGTCAGCTATGATCACCGGAGATGTTACAGAAGAAGTTGCAACACTTGATTCTACTGATGAAGAAGCCGCAGCTGTTGTAGAAGCGTGA 444 0.4122 MARMLRNAFLLKRSLFPHQILGSQVLVKVVKNKLAPPFKTAQFELEFGKGICREAEIIKLSLKYKLILKAGSMYYYNHQSFRGKDALKNFLSDDHSTLEELEMKLREKLLNAETEKVTKSAMITGDVTEEVATLDSTDEEAAAVVEA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1072 147 PRINTS RecA protein signature 27 56 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal7g1072 147 PRINTS RecA protein signature 80 97 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal7g1072 147 PANTHER RECA 19 138 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal7g1072 147 SUPERFAMILY RecA protein, C-terminal domain 53 108 IPR023400 -
Lal7g1072 147 Pfam recA bacterial DNA recombination protein 19 51 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal7g1072 147 ProSiteProfiles RecA family profile 2. 5 56 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Lal7g1072 147 Coils Coil 95 118 - -
Lal7g1072 147 PANTHER REPAIR PROTEIN RECA, PUTATIVE-RELATED 19 138 - -
Lal7g1072 147 Gene3D - 2 122 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1072 Lal-Chr7 16768490 16770464 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1072 K03553 - gmx:100781271 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1072 7 16768490 16770464 Lal7g1072 7 16768490 16770464 ECH
Lal14g1674 14 16948328 16953864 Lal7g1072 7 16768490 16770464 LSH
Lal7g1072 7 16768490 16770464 Lal17g1525 17 16600746 16608723 PCT
Lal17g1525 17 16600746 16608723 Lal7g1072 7 16768490 16770464 PCT