Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0993 ATGAAAACCATCTCCTCCATAACTCTCATCCTCTCTCTTCAAACTCTACTATTCATGATTTCAATCTCATCAAGCAATGCCAAAACCTTCTTTCCTAACGATATAACACAGATAACCTTCACTTGCTCTCGTACACCATACCCTAACCAATGCGTTGCATCTCTCATAATATATCCTGGGAGTGATAAACTCACTGTATATGGTCTTGCGGGAGTCTTGTTAAATAATGCGATAAGGGTAAAAGCAAACACAGCAATAGCAAAAATCCATCAACTTCAAAAAGCTGGAGTTGGACCTAAACAAGGCTTGGCTTCTTGTGCTAGCAAATATAATGCAATTCTGGTAACTCATATTCCACAAGCCAATGCAGCATTTGAGAAAGGGGACTTCAAGGGTGCAGAATTGGGTGCAATTGCTGCTGCTAATGAAGCTTCTAGCTGTGAAACTGTTTTCCCTGGACACCTTACTGAAGAGAATACCAATTCACGTGCTGTTGCAGCCGATGCAGCAGCTGTTGTTAAAACAACATATAGCATTACTCAAAATTGA 549 0.4044 MKTISSITLILSLQTLLFMISISSSNAKTFFPNDITQITFTCSRTPYPNQCVASLIIYPGSDKLTVYGLAGVLLNNAIRVKANTAIAKIHQLQKAGVGPKQGLASCASKYNAILVTHIPQANAAFEKGDFKGAELGAIAAANEASSCETVFPGHLTEENTNSRAVAADAAAVVKTTYSITQN 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0993 182 PANTHER PECTINESTERASE INHIBITOR-LIKE 18 176 - -
Lal7g0993 182 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 155 IPR006501 GO:0004857
Lal7g0993 182 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 18 176 - -
Lal7g0993 182 SMART PMEI_2 33 172 IPR006501 GO:0004857
Lal7g0993 182 Pfam Plant invertase/pectin methylesterase inhibitor 38 165 IPR006501 GO:0004857
Lal7g0993 182 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 164 IPR035513 -
Lal7g0993 182 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 176 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0993 Lal-Chr7 16169653 16170329 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0993 - K01051 lang:109329382 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1592 14 16435676 16436221 Lal7g0993 7 16169653 16170329 LSH
Lal7g0993 7 16169653 16170329 Lal19g1140 19 14932180 14932710 LSH