Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1592 ATGAAAAACTTCAACTCCTTAACTCTTATCTTTTGCATTCAAGCTATGTTTATCATTATTTCAATACAATCATGCCACTGCAGAACCTTCAAACCAAAGAATGAAAAACTTATAGAGAGCACTTGCAAGAAGACACCAAATTACATTGTTTGCATTAATTCTCTTAAATCAAGTCCTGGAAGCTCTAGTGCTGATGTTAGAGGTCTTGCTCTAATCATGGTGAAAGTGATGGAAACAAAAGCAAATGATGCCTTAAATAAAATCCATGACCTTCAAAGGGTGTTAACTGGACATAACCAAAAAGTAGCCTTGAATTCTTGTGCTAGCAAATATAATGCAATTTTGGTAGCTGATATTCCAAGTGCCACTGAAGCACTGCAAAAAGGGGACCCCAAGTTTGCAGAAGATGGAGCAAATGATGCTGCTAGTGAAGCTACTTATTGTGAAACTGATTACCCTGCTGGGACTTTACCTCTTACCAAATGGAATAATGCTATGCATGATGTTGCAGCTGTTACAGCAGCTATTGTTAGATCATTACTCTAG 546 0.3736 MKNFNSLTLIFCIQAMFIIISIQSCHCRTFKPKNEKLIESTCKKTPNYIVCINSLKSSPGSSSADVRGLALIMVKVMETKANDALNKIHDLQRVLTGHNQKVALNSCASKYNAILVADIPSATEALQKGDPKFAEDGANDAASEATYCETDYPAGTLPLTKWNNAMHDVAAVTAAIVRSLL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1592 181 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Lal14g1592 181 PANTHER PECTINESTERASE INHIBITOR-LIKE 18 180 - -
Lal14g1592 181 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 181 IPR035513 -
Lal14g1592 181 CDD CIF_like 35 180 IPR034087 GO:0004857|GO:0043086
Lal14g1592 181 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 180 IPR006501 GO:0004857
Lal14g1592 181 Coils Coil 74 94 - -
Lal14g1592 181 Pfam Plant invertase/pectin methylesterase inhibitor 37 176 IPR006501 GO:0004857
Lal14g1592 181 SMART PMEI_2 33 176 IPR006501 GO:0004857
Lal14g1592 181 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 18 180 - -
Lal14g1592 181 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 180 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1592 Lal-Chr14 16435676 16436221 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1592 - - gmx:100500640 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1592 14 16435676 16436221 Lal14g1592 14 16435676 16436221 ECH
Lal14g1592 14 16435676 16436221 Lal7g0993 7 16169653 16170329 LSH
Lal14g1592 14 16435676 16436221 Lal19g1140 19 14932180 14932710 LSH