Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1140 ATGACAACCTTCAACTCCTTAACTATTTTCTTCTTCCTTTGTATCTTGATTTCAATACCATCAAGCCAGTGCAGAACCTTCCAAATAAATGATGAATCATTGATAGAGAGAACATGCAAGAAGACACCATACTTCAATGTTTGTATTGAATCTCTCAAATCAAGTCCTGGAAGCTCTAGTGCTACTCTCAGGGGTCTTGCTCTAATCATGGTGGATGTAACCAAAGCAAAAGCAAATGAAGCCTTGAATATAATCCATGTGCTTGAAAGTGCTGCTGGAACTGAAGCTAAGAAAGGGTTGGAATCATGTGCTAGCAAATATAATACAATTTTAGTAGTTGATCTTCCAAATGCCATTAAAGCATTGAAGATAGGGGATGGAAAGAGTGCAGAAAAACTGGGAAATAATGCTGCTAAAGAGGCTACTAATTGTGAAACTGAATTCAATGGAACCCTCACCTCATATAATAATGCTGTGCATGATGTTGCAGCAGTGGCTGCAGCTATTGCTAGACAACTATATACCAACTAG 531 0.3823 MTTFNSLTIFFFLCILISIPSSQCRTFQINDESLIERTCKKTPYFNVCIESLKSSPGSSSATLRGLALIMVDVTKAKANEALNIIHVLESAAGTEAKKGLESCASKYNTILVVDLPNAIKALKIGDGKSAEKLGNNAAKEATNCETEFNGTLTSYNNAVHDVAAVAAAIARQLYTN 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1140 176 SMART PMEI_2 30 169 IPR006501 GO:0004857
Lal19g1140 176 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 174 IPR035513 -
Lal19g1140 176 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 173 IPR035513 -
Lal19g1140 176 Pfam Plant invertase/pectin methylesterase inhibitor 33 169 IPR006501 GO:0004857
Lal19g1140 176 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 173 IPR006501 GO:0004857
Lal19g1140 176 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 14 173 - -
Lal19g1140 176 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1140 Lal-Chr19 14932180 14932710 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1140 - - pvu:PHAVU_003G117200g 158.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1592 14 16435676 16436221 Lal19g1140 19 14932180 14932710 LSH
Lal7g0993 7 16169653 16170329 Lal19g1140 19 14932180 14932710 LSH