LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal7g0923	ATGGCCACTCAATCGCCACCTCCTCCCACCGCTTCCGATGATAACCAACGTTTAGGTGCTGAAACAGTGCAACTAACAAATGTTGATCAGCAAAATGCCGAAGAGGACCCTGCTAAACAGACTTCAACGACATCGGTCTTTGTGAACTCACAACCGTTGCGCGAAGAACAAGTTCAGAATGCTGTGAAATTTTTATCACACCCAAAAGTTAAAGGTTCCCCTGTCATCTACAGGCGATCATTTTTGGAGAAGAAGGGGCTTACGAAGGAGGAGATAGATGAAGCCTTTCGGCGTGTACCTGATTCACCTCCAAGTGTGCAGACAGCTGGTGTAAATCAAGATGAACAATTGAAGACATCATTGCATATTCCACAACAAACTTTGCAGCCAGGTTTACCTGCTTCTACTGGTGTTAACACTTCATCGCAAACCATATCACGCTCCAGATTTCACTGGTATCATGCCCTTATTGCAGTTGGGGTACTGGCTTCCTCAGGTGCTGGAACGGCTATAATAATTAAGAATTCGATTCTTCCTCGATTCAAATCTTGGGTACGCAAGGTTGTCTTAGAAGGAGATGATAAACCATTAAAGAAAACTGACAAAAAGCTGACATTAGCAGAAGAAACTGCACAAGCTGCAAAGTCAGCTGCAGCCGCAGCTGCAGATGTGGCTAGAGCAAGCCAAGAAATGCTGGCTTCAAAAGTTGAAGAGAGGAAATACTTTGTGGAAGTTGTTAGCCTTTTAGACAAGCAAATACAAGAAATGAAGTTAATGACTAATGCTATAAGTAGATTGGAAGGGCAAGAAGATCTCCGGGTCACTCAAACAAGTTCAAAGCAATTGATTACAAATGGCAAGGCAGACTATGACTTGCATTCAGTGAGGTCTTTATCCCCACCTACATCTGTTGAGCCATCAAATGGTCTTCATCCGAAGTCATATATGGAGGTAATAATGGCAATGGTCCAAAGAGGGGAGAAACCTTCTAACATTAGAGACATCAATGATTTACCCCCAAACCCTAGTCAGCAACCCTCAAATCCTCGCTTAGTGCCTAGATCCAAGGTTTGTTACAAAGAGCTTGCTTTGCATTTCCTGAAGGAAAAAAATAGGTTACATATGCTTCAGTTTCAAGTCAATAGCAGAGTGATGCCTTGGGAGGTTAGTCAGGTGCAAAACACTTCTACCCACGTTCTACAGTCTCAAGTAAATGGTGAAGAGTTGAATATCAAGGTCCAAGATACCACTCAAATAATAAATGGTGATGACCCAGTGCCCTGGTGGCAGAGGAAAAATGTCAGGATCCAAGAGATTGATAGCCAAAATGAGTATAATAGAGCACCCTATGCAGCTACTTCCAGTCAACAGCCAGTCCAACGTGCTTGGGTTCCCCCTCAACCTCCCCCTATCGCGATGCCAGAGGCTGCAGAAGCAATCAGACGCCCAAAACTGGTTGTCCAAAAGGAACAGGTGTCAGATAATCAGTCAGTATCTCAGTCTTCAGAGGTCTCTGATGAGGTGAATAGGATCTCAAAACCATCTGAATCTGAAGGTGCAGTAGAGGAAAGCACCATCAGCTCACTTCTCAACTCTGGTGAGATACAAGAGGACCATGAAGTTACACCTGAACAGTAA	1638	0.4396	MATQSPPPPTASDDNQRLGAETVQLTNVDQQNAEEDPAKQTSTTSVFVNSQPLREEQVQNAVKFLSHPKVKGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDSPPSVQTAGVNQDEQLKTSLHIPQQTLQPGLPASTGVNTSSQTISRSRFHWYHALIAVGVLASSGAGTAIIIKNSILPRFKSWVRKVVLEGDDKPLKKTDKKLTLAEETAQAAKSAAAAAADVARASQEMLASKVEERKYFVEVVSLLDKQIQEMKLMTNAISRLEGQEDLRVTQTSSKQLITNGKADYDLHSVRSLSPPTSVEPSNGLHPKSYMEVIMAMVQRGEKPSNIRDINDLPPNPSQQPSNPRLVPRSKVCYKELALHFLKEKNRLHMLQFQVNSRVMPWEVSQVQNTSTHVLQSQVNGEELNIKVQDTTQIINGDDPVPWWQRKNVRIQEIDSQNEYNRAPYAATSSQQPVQRAWVPPQPPPIAMPEAAEAIRRPKLVVQKEQVSDNQSVSQSSEVSDEVNRISKPSESEGAVEESTISSLLNSGEIQEDHEVTPEQ	545

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal7g0923	545	MobiDBLite	consensus disorder prediction	518	535	-	-
	Lal7g0923	545	MobiDBLite	consensus disorder prediction	489	508	-	-
	Lal7g0923	545	PANTHER	PEROXISOMAL MEMBRANE PROTEIN PEX14	377	527	IPR025655	GO:0005515\|GO:0005778\|GO:0016560
	Lal7g0923	545	PANTHER	PEROXISOMAL MEMBRANE PROTEIN PEX14	3	356	IPR025655	GO:0005515\|GO:0005778\|GO:0016560
	Lal7g0923	545	Gene3D	-	46	108	IPR036388	-
	Lal7g0923	545	Coils	Coil	249	269	-	-
	Lal7g0923	545	Coils	Coil	197	217	-	-
	Lal7g0923	545	Pfam	Pex14 N-terminal domain	54	98	IPR006785	-
	Lal7g0923	545	MobiDBLite	consensus disorder prediction	488	545	-	-
	Lal7g0923	545	MobiDBLite	consensus disorder prediction	330	351	-	-
	Lal7g0923	545	PANTHER	PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE	377	527	-	-
	Lal7g0923	545	PANTHER	PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE	3	356	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal7g0923	Lal-Chr7	15660853	15666438	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal7g0923	K13343		-	gmx:100786361	601.668

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal7g0923	7	15660853	15666438	Lal7g0923	7	15660853	15666438	ECH
	Lal14g1521	14	16022920	16027291	Lal7g0923	7	15660853	15666438	LSH
	Lal7g0923	7	15660853	15666438	Lal4g1115	4	14438545	14444919	PCT
	Lal4g1115	4	14438545	14444919	Lal7g0923	7	15660853	15666438	PCT