Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1115 ATGGCTACTCAATCGTCTTTTCCTCCAATTTCCACTCATCAAACCACAGGTACTGAAATTGTGGGACCAACAAATGAGAAACAGCAAAATGTAAGAGATGATCTTAATGAGAGTTCAATGGCGTCAGACTTAGTGAACTCAGAGCCAATGAGGGAGGAACAAGTTCAGAATGCTGTGAAATTTCTATCACACCCAAAAGTTAGAGGTTCTCCTGTCATCCACAGGCGATCATTTCTGGAGAAAAAAGGCCTTACGAAGGAGGAGATAGATGAAGCCTTTCGGCGTGTGCCTGCGCTACGGCCATTTGCATCGCTATCCACTATGGCATTGCGGGATTCGCCATCAAGTGTGCAGACAGCTGGGGTAAATCAAGATGGACAATTGGCACCATCTTTAAACATTCAGCAGCAATCCCAACCACAGGCTTTACAGCCAGGTGTATCTGCAAATACTGGTGTTACTACGTTGGGAACATTATCACGATTCAGTTTTCACTGGTCCCATGCCCTAATTGCAGTTGGGTTACTGGTTGCTTCAGGTGCTGGAACAGCTATGCTGATTAAGAATTCGATTCTTCCTTGGTTAAAATCTTGGATACGTGATGCTGTCTTAAAAGATGACCAATCTACAAGAAAAGACTTGAAACCAACGTCGGCTGAAGAAGCTGCACAAGCTGCAAAAGCTGCTGCACTTGCAGCTGCAGACATGGCAAAAGCAAGCCAAGAAATACTGGCTTCAAAAAGTGAAGACAGGAGATACTTTGTAGAAGTTGTCAGCCTTTTAGATAAGCAAGTTCAGGAAATGAAGCTAATGACCAATGCCGTTAGAAGACTGGAAGCTTCTGATGGAGTCTCTGTCTCAAAGCGAGAAGATCGCCAAGTCACTCAAACAAGTTCAAAGATACAGCAGCTGATTGTGAATGGAAAGGAGGACAATGAGTTGCATTCAGTGAGTTCTTCATCCCAACCTGCCAGTGCTCCTCATCCAAAGTCATATATGGAGATAATGGCCATGATACAAAGAGGGGAGAAGCCTTCTAATATTAGGGATATTGATGATTCACCACCCAACCCTAATCAGCAACCATCAAAGCCTCGCTTAGCACCTAGAACCAAGCCTTGGGAAGCTGGTCAGGTGCAAGTAAGTGGCAAGGACTTGAATTCCAGTGTCCAAGATAATGGTTACAACCCAGTGCCCTGGTGGCAAACGAAAAATGTCAGAATCAGTGAGATTGATAATGAAACCGATTTCCAAGAAGCACCTAATGGTGCTCCTTCAAGTCAGCAGCCAGTCCAACATGTGTGGGTTCCCCCTCAACCTCCTCCAATTTTGATGCCAGATGCCGCGGAAGCAATCAGACATACGAAGTCAGTGGTCCCAACGGAAAAGATGTTAGCTCATTCTTCTGACAGAGCCGTAGAAGGAAGTGGCATCAACTCACTTCTCAGATCTGGTGAACTACAAGACCATGAAGTCAATTATGAAAACAAATAA 1494 0.4471 MATQSSFPPISTHQTTGTEIVGPTNEKQQNVRDDLNESSMASDLVNSEPMREEQVQNAVKFLSHPKVRGSPVIHRRSFLEKKGLTKEEIDEAFRRVPALRPFASLSTMALRDSPSSVQTAGVNQDGQLAPSLNIQQQSQPQALQPGVSANTGVTTLGTLSRFSFHWSHALIAVGLLVASGAGTAMLIKNSILPWLKSWIRDAVLKDDQSTRKDLKPTSAEEAAQAAKAAALAAADMAKASQEILASKSEDRRYFVEVVSLLDKQVQEMKLMTNAVRRLEASDGVSVSKREDRQVTQTSSKIQQLIVNGKEDNELHSVSSSSQPASAPHPKSYMEIMAMIQRGEKPSNIRDIDDSPPNPNQQPSKPRLAPRTKPWEAGQVQVSGKDLNSSVQDNGYNPVPWWQTKNVRISEIDNETDFQEAPNGAPSSQQPVQHVWVPPQPPPILMPDAAEAIRHTKSVVPTEKMLAHSSDRAVEGSGINSLLRSGELQDHEVNYENK 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1115 497 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 1 464 IPR025655 GO:0005515|GO:0005778|GO:0016560
Lal4g1115 497 Pfam Pex14 N-terminal domain 51 95 IPR006785 -
Lal4g1115 497 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 1 464 - -
Lal4g1115 497 MobiDBLite consensus disorder prediction 281 300 - -
Lal4g1115 497 MobiDBLite consensus disorder prediction 346 374 - -
Lal4g1115 497 MobiDBLite consensus disorder prediction 1 48 - -
Lal4g1115 497 Coils Coil 261 281 - -
Lal4g1115 497 Pfam Family of unknown function (DUF5572) 327 375 - -
Lal4g1115 497 Gene3D - 38 101 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1115 Lal-Chr4 14438545 14444919 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1115 K13343 - gmx:100807229 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1521 14 16022920 16027291 Lal4g1115 4 14438545 14444919 PCT
Lal7g0923 7 15660853 15666438 Lal4g1115 4 14438545 14444919 PCT
Lal4g1115 4 14438545 14444919 Lal14g1521 14 16022920 16027291 PCT
Lal4g1115 4 14438545 14444919 Lal7g0923 7 15660853 15666438 PCT