LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal14g1521	ATGGCCACCCAATCACCACCTCTTCCCACCGCTTCCGATCTAAACCAAGGTGCTGAGACTGTGCAACCAACAAATGCCACAGAGGACCCTGCTAGACAGACTTCAGCAACATCAGTCTTTGTGAACTCACAACCATTGCGCGAAGACCAAATTCAGAATGCTGTCAAATTCTTATCTCACCCGAAAGTTAAAGGTTCCCCTGTTATCTACAGACGGTCTTTTCTGGAGAAGAAGGGACTTACGAAGGAGGAGATAGATGAAGCCTTTCAGCGTGTTCCAGATTCATCTCCAAGTGTGCATACAGATGGTGTAAATCAAGATGGACAATTGAAGACGTCATCAAATATTCAACAACAAGCCCAACCACAAACCTTGCAGAGGGCTTTACCTGCTTCTAATGGTGTTAACACTTCATCTCAAAACTTATCGTACTCCAGATTTCACTGGTACCATGCCCTTGTTGCAATTGGGCTACTGGCTGCTTCAGGTGCTGGAACAGTTATAATAATTAAGAAATCCGTTCTTCCTCGGTTAAAATCTTGGGTACGCAAGGTTGTCTTAGAGGAAGATGATGAACAATCAAAGATCACGGACAAAAAACCATCGTTAGCAGAAGAAACTGCACAAGCTGCAAAATCAGCTGCAGCTGCTGCTGCAGATGTGGCTAGAGCAAGCCAAGAAATGCTGGCTTCAAAAGTTGAAGAGAGGAAATGCTTTGTGGAAGTTTTGGGACTTTTAGACAAACAAATACAAGAAATGAAGTTAATGACTAATGCCATAAGAAGATTGGAAGGGCAAGAAGATCTCCGACTTAATCAAACAAGTTCGAAGCAACTGATTGCAAATGGGAAGGCGGACTATGGCTTGCGTTCAGTGAGATCTTCATCCCCACCTGCATATGTTGAACCGTCAAATGGTCTTCATCCAAAGTCATATATGGAGGTGCAAAACACTTCTACCCAAGTTCTTCAGTCTCAAGTAAATGGTGTAGATTTCAATATCAAGGTCCAAGATACCAATCAAATAATAAAGGGTGACAACCCAGGGCCCTGGTGGCAGAAGAAAAATGCCAGAATCACAGAGATTGATAACGAAAATGAGTACAATGGAGCACCTTATGCAGCTACTTCCAGCCAACAGCCCGTCCAACGTTCTTGGGTTCCCCCTCAACCTCCACCAATCGCGATGGCTGGGGCTGCAGAAGCTATTAGACGCCCAAAGCCGGTGGTACAAAAGGAACAGGCATCAGATAATCAGCCACTAGCTCAGTCTCCAGAGGTCTCTGATGAGGTGAATAGGATCCCTGAACAATCTAAATCTGAAGGTGTAATAGAAAGCAGCAATAGCACCTCAGTTATCAATTCTGGTGAGATACAAGAAGACCGTGAAGTTGCATATGAAGAGTAA	1407	0.4421	MATQSPPLPTASDLNQGAETVQPTNATEDPARQTSATSVFVNSQPLREDQIQNAVKFLSHPKVKGSPVIYRRSFLEKKGLTKEEIDEAFQRVPDSSPSVHTDGVNQDGQLKTSSNIQQQAQPQTLQRALPASNGVNTSSQNLSYSRFHWYHALVAIGLLAASGAGTVIIIKKSVLPRLKSWVRKVVLEEDDEQSKITDKKPSLAEETAQAAKSAAAAAADVARASQEMLASKVEERKCFVEVLGLLDKQIQEMKLMTNAIRRLEGQEDLRLNQTSSKQLIANGKADYGLRSVRSSSPPAYVEPSNGLHPKSYMEVQNTSTQVLQSQVNGVDFNIKVQDTNQIIKGDNPGPWWQKKNARITEIDNENEYNGAPYAATSSQQPVQRSWVPPQPPPIAMAGAAEAIRRPKPVVQKEQASDNQPLAQSPEVSDEVNRIPEQSKSEGVIESSNSTSVINSGEIQEDREVAYEE	468

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal14g1521	468	Coils	Coil	246	266	-	-
	Lal14g1521	468	MobiDBLite	consensus disorder prediction	94	132	-	-
	Lal14g1521	468	MobiDBLite	consensus disorder prediction	439	457	-	-
	Lal14g1521	468	PANTHER	PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE	18	315	-	-
	Lal14g1521	468	PANTHER	PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE	315	452	-	-
	Lal14g1521	468	Gene3D	-	36	99	IPR036388	-
	Lal14g1521	468	Pfam	Pex14 N-terminal domain	47	91	IPR006785	-
	Lal14g1521	468	MobiDBLite	consensus disorder prediction	1	43	-	-
	Lal14g1521	468	PANTHER	PEROXISOMAL MEMBRANE PROTEIN PEX14	315	452	IPR025655	GO:0005515\|GO:0005778\|GO:0016560
	Lal14g1521	468	PANTHER	PEROXISOMAL MEMBRANE PROTEIN PEX14	18	315	IPR025655	GO:0005515\|GO:0005778\|GO:0016560
	Lal14g1521	468	MobiDBLite	consensus disorder prediction	403	468	-	-
	Lal14g1521	468	MobiDBLite	consensus disorder prediction	412	426	-	-
	Lal14g1521	468	MobiDBLite	consensus disorder prediction	92	132	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal14g1521	Lal-Chr14	16022920	16027291	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal14g1521	K13343		-	gmx:100784152	629.402

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal14g1521	14	16022920	16027291	Lal7g0923	7	15660853	15666438	LSH
	Lal14g1521	14	16022920	16027291	Lal4g1115	4	14438545	14444919	PCT
	Lal4g1115	4	14438545	14444919	Lal14g1521	14	16022920	16027291	PCT