Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0904 ATGGATCCCAATCCAGGAACGTTCCCTATTCTGTCCTACGTCATGTCTCGTCTCCCTTCATTCGGCAGCACCACTGTCATTTCCCACATCCAATCCGACATCGAACAACCACCCTCCTCCGACCCATCCTCTTCCTCCTCTGCTTCAATCGTGGGTCAAATGCCACAACTCAAGGACCCAAAACTTCTGGCGGCAATGACCAGCGCAATCTCTGATGTGTCCCAAGCCCGATCAGTCCTCAAACTGATCGGTGAGCGGCCCACACACGAAGATGTGGATACCGCAAAGGCCCAACTGGCAGACATCGAGGCTCATCTCTCACGACAAATGCAAGAGATCGTGGGCCTGCCCAGGCCTCCAGAGATTGATCCGGACAAGTGGCAGGCCCACGTGGCACAAAAAGAGAAAGAATGCAAGGAATCAGTTGAGAAAGAGAAGCGCGTGTATAAGTCATTGATACAGCTGGATGAAATGCATGATGCTTATGAGAAGCTGCTCAATGATGCTGAGAAGCGGTTGGAGAAGCTTTACAAGAATGCCGGTGAAGATGATGATGAGAAAGGTGGTGGTGGTGGTAGTGGCAGTGAAGAGGAGGTGAATGAACAAGTACATGAGATATTGCAGGAAGCTGATGTAAAAGGGGTGGAGCGGGTGGATCTTTCGGGGCAGAAACTCAAGTTTCTGCCAGAGGCATTTGGTCATATCCCTGGCTTGGTGGTGCTTGATGCTTCCAAAAACCAGCTTTCTGTGATTCCTGACTCAATAGCTGGATTACAAAATCTGGAGGAGCTTAATATCTCTTCGAATCTTTTGGCGACACTGCCAGATTCAATTGGCTTCTTACAAAAGTTGAAAATCCTCAATGTCTCTGGAAACAAGCTAAGTGCATTTCCTGATTCCATTTGTCATTGCAAGTCATTGGTGGAGCTAGATGCAAGCTTTAACAGTCTGCAATATTTGCCAACAAACATTGGATATCAATTACAGAACTTGCAGAAGCTCATGATTCAATTGAACAAGATTCGATCTCTTCCTTCTTCTATTTGTGAAATGAAGTCGTTGCGCTATCTAGATGCTCACTTTAATGAGCTACATGGACTTCCTATTGCATTTGGGAAATTGTCTAATCTTGAATTTCTTAACTTGAGCAGCAACTTCAGTGACCTTAAAGAACTTCCAGAGACATTTGGTGATCTGATTAGCCTCAGGGAACTGGATCTCAGCAACAATCAGATTCATCTACTTCCGGATACATTCGGCCGACTTCATAATTTGTCCAAGCTAAACTTGGATCAAAACCCAATTCAGTTGCCTCCAACTGAGATCGTAAAACAAGGCGTGGTAGCCATAAAGGGTTTCATGGCTAAGAGGTGGATGGATATGTTGGCAGAGGAAGAAAGGAAGAGCACACAAGAATTGCAAGGGCAAGAGGAAGGACAAAATGGCTGGTTAACCCGAAGCACCTCGTGGTTGAAGAATGTTTCTGTAAATGTTACGGACTATGTTGGAACTGCCATTAAGGAAACAATGTCCCCCAGAACTCCCAAAGATGCTTTTCTTGATCAGCAGCTATGA 1575 0.4571 MDPNPGTFPILSYVMSRLPSFGSTTVISHIQSDIEQPPSSDPSSSSSASIVGQMPQLKDPKLLAAMTSAISDVSQARSVLKLIGERPTHEDVDTAKAQLADIEAHLSRQMQEIVGLPRPPEIDPDKWQAHVAQKEKECKESVEKEKRVYKSLIQLDEMHDAYEKLLNDAEKRLEKLYKNAGEDDDEKGGGGGSGSEEEVNEQVHEILQEADVKGVERVDLSGQKLKFLPEAFGHIPGLVVLDASKNQLSVIPDSIAGLQNLEELNISSNLLATLPDSIGFLQKLKILNVSGNKLSAFPDSICHCKSLVELDASFNSLQYLPTNIGYQLQNLQKLMIQLNKIRSLPSSICEMKSLRYLDAHFNELHGLPIAFGKLSNLEFLNLSSNFSDLKELPETFGDLISLRELDLSNNQIHLLPDTFGRLHNLSKLNLDQNPIQLPPTEIVKQGVVAIKGFMAKRWMDMLAEEERKSTQELQGQEEGQNGWLTRSTSWLKNVSVNVTDYVGTAIKETMSPRTPKDAFLDQQL 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0904 524 Coils Coil 152 186 - -
Lal7g0904 524 MobiDBLite consensus disorder prediction 32 53 - -
Lal7g0904 524 Pfam Leucine rich repeat 393 435 IPR001611 GO:0005515
Lal7g0904 524 Pfam Leucine rich repeat 330 385 IPR001611 GO:0005515
Lal7g0904 524 Pfam Leucine rich repeat 260 317 IPR001611 GO:0005515
Lal7g0904 524 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 3 506 - -
Lal7g0904 524 Coils Coil 92 112 - -
Lal7g0904 524 ProSiteProfiles Leucine-rich repeat profile. 401 422 IPR001611 GO:0005515
Lal7g0904 524 PANTHER LEUCINE-RICH REPEAT-CONTAINING 3 506 - -
Lal7g0904 524 SMART LRR_typ_2 235 257 IPR003591 -
Lal7g0904 524 SMART LRR_typ_2 328 351 IPR003591 -
Lal7g0904 524 SMART LRR_typ_2 399 421 IPR003591 -
Lal7g0904 524 SMART LRR_typ_2 281 304 IPR003591 -
Lal7g0904 524 SMART LRR_typ_2 422 445 IPR003591 -
Lal7g0904 524 SMART LRR_typ_2 374 398 IPR003591 -
Lal7g0904 524 SMART LRR_typ_2 258 279 IPR003591 -
Lal7g0904 524 SMART LRR_typ_2 305 327 IPR003591 -
Lal7g0904 524 Gene3D Ribonuclease Inhibitor 125 320 IPR032675 -
Lal7g0904 524 Gene3D Ribonuclease Inhibitor 325 450 IPR032675 -
Lal7g0904 524 SMART LRR_bac_2 399 418 - -
Lal7g0904 524 SMART LRR_bac_2 351 370 - -
Lal7g0904 524 SMART LRR_bac_2 281 300 - -
Lal7g0904 524 SMART LRR_bac_2 235 254 - -
Lal7g0904 524 SMART LRR_bac_2 374 395 - -
Lal7g0904 524 SMART LRR_bac_2 304 323 - -
Lal7g0904 524 SMART LRR_bac_2 328 347 - -
Lal7g0904 524 SMART LRR_bac_2 258 277 - -
Lal7g0904 524 MobiDBLite consensus disorder prediction 32 54 - -
Lal7g0904 524 SUPERFAMILY L domain-like 212 436 - -
Lal7g0904 524 ProSiteProfiles Leucine-rich repeat profile. 260 281 IPR001611 GO:0005515
Lal7g0904 524 MobiDBLite consensus disorder prediction 178 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0904 Lal-Chr7 15534037 15539289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0904 200 436 Receptor kinase-like Gene Family AT5G25910 31.034 4.30e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0904 - - gmx:100782818 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0904 7 15534037 15539289 Lal7g0904 7 15534037 15539289 ECH
Lal7g0904 7 15534037 15539289 Lal17g0891 17 6872474 6877692 PCT
Lal7g0904 7 15534037 15539289 Lal21g0746 21 6123518 6132974 PCT
Lal17g0891 17 6872474 6877692 Lal7g0904 7 15534037 15539289 PCT
Lal21g0746 21 6123518 6132974 Lal7g0904 7 15534037 15539289 PCT