Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0746 ATGAATCCCAACCCAGGATCCAACTTCCCCATTGTCTCTTACGTCATGTCTCGCCTCCCTTCCTTAACCGGCCGAACCACCACCACCACCACCTCCACCTCCACCGCGTTGGAGTCAAACCAAGTCGACGTCGAACAACCACTCGCTCCACCCTCCTCCGATCAACCTCATATCGTTGGCCAAATGCCCAACCTTACCGACCCCAAACTCCTTGCCTCCATGACCCGTGCAATATCTGACGTCTCTCAGACCCGAATAGTTCTCGACCTTCTCGGATCCCGGCCCAACCACGAAGACGTGGACGATTCCCGGGCCAGGATCGGGGAAATTGAAGCCCAGCTGTCATCACAGCTGGAAGAGATTGTCTTGCTGCCTCGGCCTGCTGAGATCGACATCCACGCGTGGCGGGCCCACCAGGCCGAGAAGGAGAGGGAGTGCAGGGAATTGGCTGAGAAAGAGAAGCGTGTTTACAAGGCCGTGGTGCAGCTGGATGAGATGCATGATGCGTATGAGAAGCTTCTTAGGGAAGCGGAGAAGCGGTTGGTGAAGATTTATGAGTCTGCTGAGGATGTGGAAGATGGTGGAGGTGATGGCGGAGATGCCGGTGATGGTGATGGTGATGAAGAGGTGGATGAAGAGGTTGTGGGGATACTTAATGAGGCATATGGGAATGGAATGGAAAGAGTGAATCTTTCTGGCCGAGGATTGAGGTTTCTGCCGGAGGCGTTTGGCCGGATTCCTGGCTTGGTGGTGCTTGATATCTCGACCAATCAGCTTTCGGCAATCCCTGACTCAATAGCTGGACTGGAAAATCTTGAGGAGCTAAATATCTCTTCAAATCTTCTGGAATCACTGCCAGATTCAATTGGGTTGTTGCAAAAGTTGAAATTCCTTTATGTCTCTGGAAACAAGCTGAGTGCCCTTCCCGATTCCATTTGTCAGTGCAGGTCATTGGTGGTGCTGGATGCAAGCTTTAACAATTTGTCATATTTGCCAACAAACATTGGATTTGAGTTACCAAACCTACAAAAGCTATTGATTCAATTGAACAAGATTCGATCTCTTCCCTCATCTGTTTGTGAGATGAAATCGTTGCGTTATCTGGATGCTAACTTCAATGCGCTACATGGGCTTCCTATTGCAATTGGGAGGCTGACTAATCTTGAATTTCTCAACCTCAGCAGTAACTTCAGCGACCTTAAAGAACTACCAGAGACATTTGGTGATTTGATTAACCTTAGCGAATTGGATCTCAGCAATAATCAGATTCATGCACTTCCTGATTCATTTGGTCGCCTTGATAAATTGACCAAGCTAAACTTGGAGCAGAATCCTCTTGAATTGCCACCACCGGAGATTGTAAATCAAGGGGTCACGACCATTAAGACTTTTATGGCTAAGAGGTGGATTGATATATTGATGGAGGAAGAAAGGAAAGGCAATGAAGAAATGCAAGAACAAGGACAAAGTAGCTGGCTTACAAAAAGTACCTCCTGGTTGAAGAATGTACCTGGAAATGTCGTCGGGTATCTCGGGCCTACGTCTTCAACACCCAAATCTACAAGCGAAGCTTTTCTTGATAGGCAGTTATGA 1593 0.4802 MNPNPGSNFPIVSYVMSRLPSLTGRTTTTTTSTSTALESNQVDVEQPLAPPSSDQPHIVGQMPNLTDPKLLASMTRAISDVSQTRIVLDLLGSRPNHEDVDDSRARIGEIEAQLSSQLEEIVLLPRPAEIDIHAWRAHQAEKERECRELAEKEKRVYKAVVQLDEMHDAYEKLLREAEKRLVKIYESAEDVEDGGGDGGDAGDGDGDEEVDEEVVGILNEAYGNGMERVNLSGRGLRFLPEAFGRIPGLVVLDISTNQLSAIPDSIAGLENLEELNISSNLLESLPDSIGLLQKLKFLYVSGNKLSALPDSICQCRSLVVLDASFNNLSYLPTNIGFELPNLQKLLIQLNKIRSLPSSVCEMKSLRYLDANFNALHGLPIAIGRLTNLEFLNLSSNFSDLKELPETFGDLINLSELDLSNNQIHALPDSFGRLDKLTKLNLEQNPLELPPPEIVNQGVTTIKTFMAKRWIDILMEEERKGNEEMQEQGQSSWLTKSTSWLKNVPGNVVGYLGPTSSTPKSTSEAFLDRQL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0746 530 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 33 515 - -
Lal21g0746 530 SUPERFAMILY L domain-like 224 455 - -
Lal21g0746 530 MobiDBLite consensus disorder prediction 191 208 - -
Lal21g0746 530 SMART LRR_typ_2 385 409 IPR003591 -
Lal21g0746 530 SMART LRR_typ_2 246 268 IPR003591 -
Lal21g0746 530 SMART LRR_typ_2 339 362 IPR003591 -
Lal21g0746 530 SMART LRR_typ_2 433 456 IPR003591 -
Lal21g0746 530 SMART LRR_typ_2 269 291 IPR003591 -
Lal21g0746 530 SMART LRR_typ_2 410 432 IPR003591 -
Lal21g0746 530 SMART LRR_typ_2 292 315 IPR003591 -
Lal21g0746 530 SMART LRR_typ_2 316 338 IPR003591 -
Lal21g0746 530 PRINTS Leucine-rich repeat signature 249 262 - -
Lal21g0746 530 PRINTS Leucine-rich repeat signature 410 423 - -
Lal21g0746 530 PANTHER LEUCINE-RICH REPEAT-CONTAINING 33 515 - -
Lal21g0746 530 SMART LRR_bac_2 339 358 - -
Lal21g0746 530 SMART LRR_bac_2 385 406 - -
Lal21g0746 530 SMART LRR_bac_2 292 311 - -
Lal21g0746 530 SMART LRR_bac_2 410 429 - -
Lal21g0746 530 SMART LRR_bac_2 315 334 - -
Lal21g0746 530 SMART LRR_bac_2 362 381 - -
Lal21g0746 530 SMART LRR_bac_2 269 288 - -
Lal21g0746 530 SMART LRR_bac_2 246 265 - -
Lal21g0746 530 ProSiteProfiles Leucine-rich repeat profile. 271 292 IPR001611 GO:0005515
Lal21g0746 530 Pfam Leucine rich repeat 404 446 IPR001611 GO:0005515
Lal21g0746 530 Pfam Leucine rich repeat 271 328 IPR001611 GO:0005515
Lal21g0746 530 Pfam Leucine rich repeat 340 396 IPR001611 GO:0005515
Lal21g0746 530 Gene3D Ribonuclease Inhibitor 351 466 IPR032675 -
Lal21g0746 530 Coils Coil 160 187 - -
Lal21g0746 530 Gene3D Ribonuclease Inhibitor 222 350 IPR032675 -
Lal21g0746 530 ProSiteProfiles Leucine-rich repeat profile. 412 433 IPR001611 GO:0005515
Lal21g0746 530 MobiDBLite consensus disorder prediction 186 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0746 Lal-Chr21 6123518 6132974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0746 226 466 Receptor kinase-like Gene Family AT5G56040 28.378 1.45e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0746 - - gmx:100803823 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0746 21 6123518 6132974 Lal21g0746 21 6123518 6132974 ECH
Lal17g0891 17 6872474 6877692 Lal21g0746 21 6123518 6132974 LSH
Lal7g0904 7 15534037 15539289 Lal21g0746 21 6123518 6132974 PCT
Lal21g0746 21 6123518 6132974 Lal7g0904 7 15534037 15539289 PCT