Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0867 ATGGCCATGAACCACGATTCTTGGGCTTTTATTTTCGGTCTTATAGGCAACATTATCTCCTTTATGGTATTCCTTAGTCCAATCCCAACTTTTTACCAAATTTACAAGAAAAAAACATCTGAAGGGTACCAATCACTTCCATATGTTGTTGCACTCCTCAGTGCAATGCTTTGGATTTACTATGCATTGGTAAAAAAAGATGCTGCACTTCTTCTCATAACCATTAACACTTTTGGAATTGTTGTGGAGTCTTCTTACCTTGCACTCTTCCTATTTTATGCATCAAAGAAGGCTAGGGTTTCCACCATCAAGCTTCTTCTCTTGTTGAACGTGTTTGGTTATGGAGCCATGCTTCTAGCAACTCTCTACTTATCTAAGGGAACAACACGTCTTGCTATTATAGGATGGATTTGCTTGGTTTTTAACATAAGTGTATTTGCTGCACCTCTCTTCATCATGAAAAAAGTCATAAAAACAAGGAGTGTGGAATACATGCCCTTTACTTTGTCCTTCTTTCTAACCATCAACGCTGTTATGTGGTTCTTCTATGGCCTTTTCCTTAGGGACTATTACATTGCTCTCCCAAATACACTTGGGTTTTTGTTTGGCATAGTTCAGATGGTTCTGTATTTGGTGTACAGAAATGCCACACCAATAGCACTAGAGAATCCAATGAAGGTTCAAGAATTAAATGCTCATATTGTTGATGTTGTGAAGGTTCAAGATGGAGCTAAAAGTGGTGCTATTGACAAAGTCTGA 759 0.3821 MAMNHDSWAFIFGLIGNIISFMVFLSPIPTFYQIYKKKTSEGYQSLPYVVALLSAMLWIYYALVKKDAALLLITINTFGIVVESSYLALFLFYASKKARVSTIKLLLLLNVFGYGAMLLATLYLSKGTTRLAIIGWICLVFNISVFAAPLFIMKKVIKTRSVEYMPFTLSFFLTINAVMWFFYGLFLRDYYIALPNTLGFLFGIVQMVLYLVYRNATPIALENPMKVQELNAHIVDVVKVQDGAKSGAIDKV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0867 252 PANTHER RAG1-ACTIVATING PROTEIN 1 5 241 - -
Lal7g0867 252 Gene3D - 11 100 - -
Lal7g0867 252 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 5 241 - -
Lal7g0867 252 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Lal7g0867 252 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Lal7g0867 252 Gene3D - 130 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0867 Lal-Chr7 15218478 15220902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0867 1 241 Miscellaneous Gene Families AT5G50790 54.959 1.41e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0867 K15382 - gmx:100805676 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0867 7 15218478 15220902 Lal7g0867 7 15218478 15220902 ECH
Lal14g1442 14 15585522 15587922 Lal7g0867 7 15218478 15220902 LSH
Lal7g0867 7 15218478 15220902 Lal19g1012 19 13989509 13992240 LSH
Lal7g0867 7 15218478 15220902 Lal17g0828 17 6148084 6151018 PCT
Lal17g0828 17 6148084 6151018 Lal7g0867 7 15218478 15220902 PCT