Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0828 ATGACCACTCATCATGAGTCATTGGCTTTTGTTTTCGGCCTCTTAGGCAACATCATCTCCTTTATGGTGTTTCTTTCTCCAATGCCAACTTTTTACAAAATCTACAAGAAAAAAAATGCAGAAGGGTATCAATCAATTCCATATGTTGTTGCACTATTTAGTTCAATGCTTTGGATTTATTACGCACTTATCAAAGGAGAATCTAGCCTCCTTCTCATCACCATTAACTCCTTTGGATGTGTGATAGAAACAATTTACCTTGCCATGTTCCTATTTTACGCCACAAAGAAAACCATGCTAAACTCGTATATAACTCTAGCTTCTGTAATGTATCAGCTTTCAACCATCAAGCTTCTTCTCTTGTTGAATGTGTTTGGGTATGGAGCTATGCTTCTTTCAACACTCTACCTGGCCAAGGGATCTAAACGTCTTTCTATTATAGGATGGATTAGTTTGGTTTTCAATATAAGCGTATTTGCTGCTCCTCTAGGCATTATGAGACGCGTGATAAAGACGAGGAGTGTGGAATACATGCCATTTACTTTGTCCTTCTTTTTGACCTTAAATGCTGTCATGTGGTTCTTCTATGGTCTTCTCCTCAAGGATTATTACATTGCTTTCCCAAACACAATAGGATTTTTGTTCGGAATAATCCAGATGGTGCTATATTTAGTATATAGAAACGCAAAGCCATTAGCACTACCGGAACCAGTGAAGGTGCAAGAACTAAATGGCCATGTTATTGATGTTGTGAAGCTGAGTACAGTGGTAACATTAGATCCGAATCATGTAGCTGAAGGTGGTGAAGTGATAATTACAACAGTTGAAGATCCAAATGGAAAAGAAGAGACACCAAAGGATTCAGTTGCCAAAATATGA 879 0.38 MTTHHESLAFVFGLLGNIISFMVFLSPMPTFYKIYKKKNAEGYQSIPYVVALFSSMLWIYYALIKGESSLLLITINSFGCVIETIYLAMFLFYATKKTMLNSYITLASVMYQLSTIKLLLLLNVFGYGAMLLSTLYLAKGSKRLSIIGWISLVFNISVFAAPLGIMRRVIKTRSVEYMPFTLSFFLTLNAVMWFFYGLLLKDYYIAFPNTIGFLFGIIQMVLYLVYRNAKPLALPEPVKVQELNGHVIDVVKLSTVVTLDPNHVAEGGEVIITTVEDPNGKEETPKDSVAKI 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0828 292 Gene3D - 11 100 - -
Lal17g0828 292 Gene3D - 142 232 - -
Lal17g0828 292 PANTHER RAG1-ACTIVATING PROTEIN 1 4 270 - -
Lal17g0828 292 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 270 - -
Lal17g0828 292 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Lal17g0828 292 Pfam Sugar efflux transporter for intercellular exchange 146 230 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0828 Lal-Chr17 6148084 6151018 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0828 1 288 Miscellaneous Gene Families AT5G50790 49.831 6.26e-98 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0828 K15382 - gmx:100794434 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0828 17 6148084 6151018 Lal17g0828 17 6148084 6151018 ECH
Lal14g1442 14 15585522 15587922 Lal17g0828 17 6148084 6151018 PCT
Lal7g0867 7 15218478 15220902 Lal17g0828 17 6148084 6151018 PCT
Lal19g1012 19 13989509 13992240 Lal17g0828 17 6148084 6151018 PCT
Lal17g0828 17 6148084 6151018 Lal14g1442 14 15585522 15587922 PCT
Lal17g0828 17 6148084 6151018 Lal7g0867 7 15218478 15220902 PCT
Lal17g0828 17 6148084 6151018 Lal19g1012 19 13989509 13992240 PCT