Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1012 ATGACCATGAATCGAGAGTCTTGGGTTTTTGTTTTCGGCCTTATAGGCAACATCATCTCCTTTATGGTGTTCCTCAGTCCAATACCAACTTTTTACCAAATTTACAAGAAGAAAACTTCTGAAGGGTACCAATCACTTCCCTATGTAGTTGCACTCCTCAGTGCAATGCTTTGGATTTACTATGCATTGGTGAAAAAGGAATCAGCCCTTCTTCTCATAACCATTAATACCTTTGGAATTGTTGTGGAATCTTCTTACCTTGCATTCTTCCTATTTTATTCCTCAAAGAAAGCTAGGCTTTCCACCATCAAGCTTCTTCTCTTGTTGAATGTTTTTGGGTATGGAGCCATGCTTCTAGCAACTCTCTACTTGTCCAAGGGAGCAAAGCGTCTAGCTATTATAGGATGGATTTGCTTGGTTTTCAACATAACTGTATTTGCTGCACCTCTCTTCATCATGAAAAAAGTCATAACGACAAGGAGCGTGGAATACATGCCCTTTACTTTGTCCTTCTTTTTAACAATCAACGCTGTTATGTGGTTCTTCTATGGCCTTTTCCTAAGGGACTATTATATTGCTCTCCCAAATACACTTGGGTTTCTATTCGGCATAGTTCAGATGGTGCTGTATTTGATGTACAGAAACGCCATACCAGTGGCACTAGAGAATCCAAAGAAAGTTCAAGAATTGAATGGCCATATTGTTGAAGTTGAGAAGGTGCAAGATGGAGCAAGAGGTGATGCTATTGGCAAAGTTTGA 759 0.3979 MTMNRESWVFVFGLIGNIISFMVFLSPIPTFYQIYKKKTSEGYQSLPYVVALLSAMLWIYYALVKKESALLLITINTFGIVVESSYLAFFLFYSSKKARLSTIKLLLLLNVFGYGAMLLATLYLSKGAKRLAIIGWICLVFNITVFAAPLFIMKKVITTRSVEYMPFTLSFFLTINAVMWFFYGLFLRDYYIALPNTLGFLFGIVQMVLYLMYRNAIPVALENPKKVQELNGHIVEVEKVQDGARGDAIGKV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1012 252 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Lal19g1012 252 Pfam Sugar efflux transporter for intercellular exchange 133 215 IPR004316 GO:0016021
Lal19g1012 252 Gene3D - 10 99 - -
Lal19g1012 252 PANTHER RAG1-ACTIVATING PROTEIN 1 4 241 - -
Lal19g1012 252 Gene3D - 129 218 - -
Lal19g1012 252 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1012 Lal-Chr19 13989509 13992240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1012 1 239 Miscellaneous Gene Families AT5G50800 53.333 1.96e-91 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1012 K15382 - gmx:100805676 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1012 19 13989509 13992240 Lal19g1012 19 13989509 13992240 ECH
Lal14g1442 14 15585522 15587922 Lal19g1012 19 13989509 13992240 LSH
Lal7g0867 7 15218478 15220902 Lal19g1012 19 13989509 13992240 LSH
Lal19g1012 19 13989509 13992240 Lal17g0828 17 6148084 6151018 PCT
Lal17g0828 17 6148084 6151018 Lal19g1012 19 13989509 13992240 PCT