Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0152 ATGGGTTTGATTTCTGGGATTTTCATGGGAATGTTATTTGGCATAGCATTGATGGCAGGATGGGAACGTATGATGAGGTACCGTAGTTCCAAACGAATTTCAAAGGCAGTTGACATTAAACTCCTTGGGTCCCTTAACAGAGATGATTTAAAGAAACTTTGTGGTGATGCTATTCCCGAATGGATATCTTTTCCGGTATTTGAGCAGGTGAAATGGCTAAACAAGGAGCTTACCAAACTCTGGCCATTTGTTGCAGAAGCAGCAAGTCTGGTGATCAGAGAATCTGTTGAACCACTACTGGAAGAGTACAGACCTACTGGAATTACTTCATTGAAGTTCAGCAAGCTGTCACTTGGAACCGTGCCTCCGAAAATTGAAGGGATTCGTGTTCAGAGTCTTACCAAAGGTCAAATCATTATGGACATTGATTTCCGTTGGGGTGGCGATCCCAGTATTATTTTGGCTGTTGAAGCTGCACTTGTTGCATCAATCCCTATTCAGTTAAAGGATCTGCAGGTTTTCACTGTTATCCGTGTTATATTCCAACTCTCCGAAGAGATCCCATGCATTTCTGCTGTTGTTGTTGCCCTACTTGCTGAGCCAAAGCCGAGGATTGATTACACTCTGAAAGCTGTTGGTGGAAGTCTGACAGCACTTCCTGGAATTTCAGATATGATTGATGATACTGTCGACACAATTGTTACTGATATGCTCCAGTGGCCTCATAGAATTGTCGTTCCACTCGGTGGTATCTCTGTCGATACTAGTGAACTGGAGCTTAAACCCCAGGGAAGACTTACAGTGACTATAGTTAAGGCGAATGATTTAAAGAATATGGAAATGATCGGAAAATCCGATCCTTATGTAGTTGTTTATATTCGACCACTGTTTAAGTTTAAAACCAAGGTTATTGATAACAACTTGAATCCTGTTTGGAATGAGACATTTGACTTGATTGCAGAAGACAAGGAGACTCAGTCACTCATTTTCGAGGTTTTCGATGAAGACATCGGACAGGATAAGCAATTGGGATTAGTAAAGTTACCCCTTATCGACCTGGAAGCAAGCAATGAGAAGCAGTTTGAGTTGAGGCTGATGCCATCACTCGATATGCTGAAGGTGAAAGATAAGAAAGATCGAGGAACCTTAACCGTAAAGATCTTATATCATCAATTTAACAAGGAAGAACAATTGGCTGCACTAGAAGTAGAGAAAAGGATACTAGAAGAAAGGAAGAAACTGAAAGAGGAGGGAGTGATAGGAAGCACAATGGATGCACTAGATGGAGCTGTATCAGTTGTAGGGTCTGGTGTTGGACTAGTTAGCAGTGGCATTGGTGCTGGAGCAGGTTTTGTCGGGAGCGGTATTGGAGCCGTCGGTAGCGGACTGAGTAAGGCAGGAAGGTTCATGGGCAGGACAATCACCGGTGGTCATAGCGGTTCCCGAAAAGGTGGCTCATTTACTGCAGTTAGTAATCCACAGGAGAATGGTGGTGGTGGTGGTGCAAAGCCACTGCAATGA 1521 0.4333 MGLISGIFMGMLFGIALMAGWERMMRYRSSKRISKAVDIKLLGSLNRDDLKKLCGDAIPEWISFPVFEQVKWLNKELTKLWPFVAEAASLVIRESVEPLLEEYRPTGITSLKFSKLSLGTVPPKIEGIRVQSLTKGQIIMDIDFRWGGDPSIILAVEAALVASIPIQLKDLQVFTVIRVIFQLSEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTALPGISDMIDDTVDTIVTDMLQWPHRIVVPLGGISVDTSELELKPQGRLTVTIVKANDLKNMEMIGKSDPYVVVYIRPLFKFKTKVIDNNLNPVWNETFDLIAEDKETQSLIFEVFDEDIGQDKQLGLVKLPLIDLEASNEKQFELRLMPSLDMLKVKDKKDRGTLTVKILYHQFNKEEQLAALEVEKRILEERKKLKEEGVIGSTMDALDGAVSVVGSGVGLVSSGIGAGAGFVGSGIGAVGSGLSKAGRFMGRTITGGHSGSRKGGSFTAVSNPQENGGGGGAKPLQ 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0152 506 SMART C2_3c 265 362 IPR000008 -
Lal7g0152 506 PRINTS C2 domain signature 281 293 IPR000008 -
Lal7g0152 506 PRINTS C2 domain signature 306 319 IPR000008 -
Lal7g0152 506 PRINTS C2 domain signature 328 336 IPR000008 -
Lal7g0152 506 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 68 248 IPR039010 -
Lal7g0152 506 Gene3D C2 domain 259 417 IPR035892 -
Lal7g0152 506 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 435 IPR045050 GO:0008289
Lal7g0152 506 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 436 499 IPR045050 GO:0008289
Lal7g0152 506 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 262 391 IPR035892 -
Lal7g0152 506 MobiDBLite consensus disorder prediction 474 506 - -
Lal7g0152 506 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 66 249 IPR031468 GO:0008289
Lal7g0152 506 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 435 - -
Lal7g0152 506 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 436 499 - -
Lal7g0152 506 Pfam C2 domain 264 360 IPR000008 -
Lal7g0152 506 ProSiteProfiles C2 domain profile. 247 363 IPR000008 -
Lal7g0152 506 MobiDBLite consensus disorder prediction 479 495 - -
Lal7g0152 506 CDD C2 266 360 - -
Lal7g0152 506 Coils Coil 391 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0152 Lal-Chr7 1719670 1727018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0152 249 350 Lipid Metabolism Gene Families AT3G61300 34.951 5.20e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0152 - - gmx:100777838 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0152 7 1719670 1727018 Lal7g0152 7 1719670 1727018 ECH
Lal14g0907 14 11504860 11512625 Lal7g0152 7 1719670 1727018 LSH
Lal1g2044 1 22594320 22601587 Lal7g0152 7 1719670 1727018 PCT
Lal7g0152 7 1719670 1727018 Lal1g2044 1 22594320 22601587 PCT