Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0907 ATGGGTTTGATTTCTGGGATTTTGATGGGGTTATTATTTGGCATAGCATTGATGGCAGGATGGGAGCGCATGATGAGGTATAGAAGTGCTAAACGAATTGCAAAGGCCGTTGACATTAAACTCCTTGGTTCCCTTAGCAGAGATGATGTAAAGAAGCTTTGTGGTGATAATTGTCCTGAGTGGGTATCTTTTCCGTTATATGAGCAGGTGAAATGGCTAAACAAGGAGCTGACCAAACTGTGGCCCTTTGTTGCAGAAGCGGCAACTCTGGTGATCAGAGAATCTGTTGAACCATTACTGGAAGAGTACAGACCTACTGGAATTACTTCATTGAAGTTCAGCAAGCTCTCACTTGGAACTGTGCCTCCAAAAATTGAAGGGATTCGTGTTCAGAGTCTTACCAAAGGTCAAATCATTATGGACATTGATTTCCGCTGGGGTGGTGATCCCAGTATTATTTTGGCTGTTGAAGCTGCACTTGTTGCATCTATCCCTATTCAGTTGAAGGATCTGCAGGTTTTCACTGTTATCCGTGTTATATTCCAACTCGCTGAAGAGATCCCGTGCATTTCTGCTGTTGTGGTTGCCTTACTTGCTGAGCCAAAGCCGAGGATTGATTACACTCTGAAAGCTGTTGGTGGAAGTTTGACAGCACTTCCTGGAATTTCAGATATGATTGACGATACTGTCAACACAATTGTTACTGACATGCTCCAATGGCCTCATAGGATTGTCGTTCCACTCGGTGGTATCCCTGTTGATACTAGTGAACTGGAGCTTAAACCCCATGGAAGGCTTACAGTAACTATAGTGAAAGCGAATGATTTAAAGAATAAGGAAATGATTGGAAAGTCTGATCCTTATGTAGTTGTGTATATTCGTCCACTGTTTAAGGTTAAAACCAAGGTTATTGATGACAACTTGAATCCTGTTTGGAATGAGACATTTGAAGTGATTGCTGAAGACAAGGAGACCCAGTCACTCATTCTCGAGGTTTTTGATAAAGACATTGGACAAGATAAGCGATTGGGATTAGCAAAAGTACCCCTTATTGACCTCGAAGCAGAAAATGAGAAGCACCTTGAATTGAGGCTGCTGCCATCGCTTGATATGCTGAAGGTGAAAGACAAGAAAGATCGAGGAACTTTAACAGTAAAGGTCGTGTATCATCAATTTAACAAGGAAGAGCAATTGGCTGCACTAGAAGTAGAGAAAAAGATACTAGAAGAAAGGAAGAAGCTGAAAGAGGAGGGAGTGATAGGAAGCACAATGGATGCACTAGATGGAGCTGTATCAGTTGTAGGGTCTGGTGTTGGACTTGTTGGCAGTGGACTTGTCGGTGGAGTTGGACTTGTTGGCAGTGGTGTTGGTGCCGGAGCTGGACTTGTCGGGAGTGGTTTTGGAGCTGTCGGTAGCGGACTGAGCAAGGCAGGAAGGTTCATGGGTAGGACTATCATAGGTGGTCATAGTACCGCCAGAAAGAGTGGATCGTCTACTCCGGTTAGTAATCCACAGGAGAATGGTGGTGGTGCAAAGCCACTGCAATGA 1548 0.4399 MGLISGILMGLLFGIALMAGWERMMRYRSAKRIAKAVDIKLLGSLSRDDVKKLCGDNCPEWVSFPLYEQVKWLNKELTKLWPFVAEAATLVIRESVEPLLEEYRPTGITSLKFSKLSLGTVPPKIEGIRVQSLTKGQIIMDIDFRWGGDPSIILAVEAALVASIPIQLKDLQVFTVIRVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTALPGISDMIDDTVNTIVTDMLQWPHRIVVPLGGIPVDTSELELKPHGRLTVTIVKANDLKNKEMIGKSDPYVVVYIRPLFKVKTKVIDDNLNPVWNETFEVIAEDKETQSLILEVFDKDIGQDKRLGLAKVPLIDLEAENEKHLELRLLPSLDMLKVKDKKDRGTLTVKVVYHQFNKEEQLAALEVEKKILEERKKLKEEGVIGSTMDALDGAVSVVGSGVGLVGSGLVGGVGLVGSGVGAGAGLVGSGFGAVGSGLSKAGRFMGRTIIGGHSTARKSGSSTPVSNPQENGGGAKPLQ 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0907 515 Gene3D C2 domain 260 418 IPR035892 -
Lal14g0907 515 MobiDBLite consensus disorder prediction 488 515 - -
Lal14g0907 515 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 262 391 IPR035892 -
Lal14g0907 515 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 509 IPR045050 GO:0008289
Lal14g0907 515 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 68 248 IPR039010 -
Lal14g0907 515 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 66 249 IPR031468 GO:0008289
Lal14g0907 515 MobiDBLite consensus disorder prediction 490 509 - -
Lal14g0907 515 PRINTS C2 domain signature 281 293 IPR000008 -
Lal14g0907 515 PRINTS C2 domain signature 306 319 IPR000008 -
Lal14g0907 515 PRINTS C2 domain signature 328 336 IPR000008 -
Lal14g0907 515 SMART C2_3c 265 362 IPR000008 -
Lal14g0907 515 Pfam C2 domain 264 359 IPR000008 -
Lal14g0907 515 ProSiteProfiles C2 domain profile. 247 363 IPR000008 -
Lal14g0907 515 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 509 - -
Lal14g0907 515 CDD C2 266 360 - -
Lal14g0907 515 Coils Coil 391 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0907 Lal-Chr14 11504860 11512625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0907 266 356 Lipid Metabolism Gene Families AT4G00700 38.462 3.19e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0907 - - gmx:100798484 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0907 14 11504860 11512625 Lal14g0907 14 11504860 11512625 ECH
Lal14g0907 14 11504860 11512625 Lal7g0152 7 1719670 1727018 LSH
Lal1g2044 1 22594320 22601587 Lal14g0907 14 11504860 11512625 PCT
Lal14g0907 14 11504860 11512625 Lal1g2044 1 22594320 22601587 PCT