Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1719 ATGGTGGGTGTTACAGTGTCACAGTACCTTCTAGAAGTTGTGTCACTTATGATGGTGGGACAACTTGGGATACTAGTGTCCTTTTCTGGGGTTGCTATTGCTTCTTCTTTTGCTGAAGTTACTGGCTATAGTGTACTTCTCGGAATGGCTGGTGCATTGGAAACATTATGCGGCCAAAACTATGGTGCAGAAGAATATCGAAAGATCGGAAACTACACTTGCTGTGCAATTCTCACTCTTACTTTGGTTTGTCTCCCCATATCTGTCATGTGGATATTCGTCCATAAAATACTCTTGTTATTTGTTCAAGATCGTGCAGCTCGCGAATACTGCATTTGGCTGATCCCATCACTGTATGGCTATGCCGTTCTTCAATCTCTGATGCGCTACTTCCAGACTCAAAGTATGATCTTTCCCATGGTTTTTAGCTCAATTGCAGTTCTGTTTTTGCATATTCCTATTTGTTGGGTTTTGGTATTTAAATTGGGAATGGGACATGTTGGAGCAGCATTTGCTATTGCAATTTCATATTGGTTGAATGTCATTTGCCTTGGATTTTATATGAAGTATTCTTCAGCATGTCAGAAATCCAAGGTTGTGTTTTCTAGTAATGTTTTATCAAACATTAAAGAATTCTTGCACTATGCTATCCCTTCTGGACTAATGCTTTGTTTTGAAGGGTGGTCATTCGAATTGCTTACATTACTTGCCGGGCTTTTACCTAATCCAAAACTCGAGACCTCGGTTCTTTCGGTTTGCCTTAACATGACTACATTGCACTACTTCATTCCTTATGCTGTTGGAGCTTCGGCAAGTACTCGGGTTTCGAACGAAATAGGAGCAGGGAATCTGAAGGCAGCACAAGGCACTGTTCGTGTTGTTGTGATTATCGGAATCGTCGAGGCTGTTATTTTCAGCACATTCTTCTATTGTAGCAGGAACATATTAGGATATGCTTATATCAATGATAAGGAAGTTGTAGATTATTTTGCAGATATGGTTCCTCTTCTTTGTGATTCTATTAGTGCAGACAGTGTAATAGGAGTACTTTCTGGAATTGCCATAGGTGGAGGATTTCAGAAAACAGGAGCTTATGTTAACCTTGGAGCATATTATCTTGTAGGAGCTCCTTTAGCAGTCTTTTTGGGTTTTGTCCTAAAGTTAAGGTCCAAGGGACTCTGGATGGGAACTCTAACAGGGTCTATCCTACAAATAATTATACTGTCTGGGGTAATTGCATCAACAAATTGGGAGAAAGAGGCTAGAAAAGCAAGACATAGAATAGCTCAGAAGTCAATTAATGTTCATGAAGGACTATTAGTATGA 1326 0.3989 MVGVTVSQYLLEVVSLMMVGQLGILVSFSGVAIASSFAEVTGYSVLLGMAGALETLCGQNYGAEEYRKIGNYTCCAILTLTLVCLPISVMWIFVHKILLLFVQDRAAREYCIWLIPSLYGYAVLQSLMRYFQTQSMIFPMVFSSIAVLFLHIPICWVLVFKLGMGHVGAAFAIAISYWLNVICLGFYMKYSSACQKSKVVFSSNVLSNIKEFLHYAIPSGLMLCFEGWSFELLTLLAGLLPNPKLETSVLSVCLNMTTLHYFIPYAVGASASTRVSNEIGAGNLKAAQGTVRVVVIIGIVEAVIFSTFFYCSRNILGYAYINDKEVVDYFADMVPLLCDSISADSVIGVLSGIAIGGGFQKTGAYVNLGAYYLVGAPLAVFLGFVLKLRSKGLWMGTLTGSILQIIILSGVIASTNWEKEARKARHRIAQKSINVHEGLLV 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1719 441 PANTHER PROTEIN DETOXIFICATION 7-RELATED 1 427 - -
Lal6g1719 441 CDD MATE_eukaryotic 1 423 IPR045069 GO:0042910|GO:1990961
Lal6g1719 441 Pfam MatE 218 380 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal6g1719 441 Pfam MatE 5 157 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal6g1719 441 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 427 - -
Lal6g1719 441 TIGRFAM matE: MATE efflux family protein 2 394 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1719 Lal-Chr6 19893884 19896873 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1719 K03327 - gmx:100816460 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1719 6 19893884 19896873 Lal6g1719 6 19893884 19896873 ECH
Lal18g0609 18 5247549 5254072 Lal6g1719 6 19893884 19896873 LSH
Lal22g1372 22 16636728 16644792 Lal6g1719 6 19893884 19896873 LSH