Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1351 ATGGATTTCAATCTCAAAGGAATGTTGCTGCTTCTGTTTATTCTAACTGTGGAATTATGTTTCGGATCCAATGCAAATTTGGTGCTGCCCGTTGAGCGAAAATTTATTGGTCCTCATATAAGTTTGAGCCAAATCAAAGCTCATGATGCTCGTCGCCATGGAAGGTTTCTTTCTGGCATTGATATCGAACTTGGTGGCAATGGCCTCCCTTCTAAAACTGGGTTATATTATACCAAAATCGGGCTTGGCTCCCCTGCAAAGGACTACTATGTGCAGGTTGACACCGGGAGTGATGTTCTCTGGGTAAATTGTGAAGGTTACACAACAATAGCATTCACTGCAGTTGCGAACAATTGTGAGAAAATGTGTGTTGTACATGACCGCAATTGCAGTTGCAATGCAGCTGTGGAGATTTACCGAAACTGTAATGTTGTGATTGTAGACTGTGATATCGAATTGCACCTCTATAATTCAAAGGATTCGAATACTTCGGAAGTTGTCCCTTGCAATGGTGATTTTTGCCAGGCCACATATGGCGGTGAAATTTCGGATTGCAAAAAAGGAAAGTCCTGCCCATACAGCATAATTTATGGAGATGGAGGTCAAACTACTGGATCCTTTGTGAGGGATTTACTTACATTTAATCGAGTCAATGGTAATCTCCGCACTGGACCAGATAGTAGCAGCGTGATCTTTGGGTGTGGTACTAATCAATCTGGAACATTGGGAAAGTCCGAAGATGATGCCCTTTGTGGAATAATGGGTTTTGGACAATCAAATTCTTCTGTGCTTTCACAACTTGCTGCATCTGGAAAGGTGAAAAAAGTATTTTCACACTGCCTTGACACTATTCAAGGAGGTGGAATATTTTCCATTGGTGAAGTGGTGCAACCAAAATTTAATAGAACTTCATTGTTATTTGACTGCTATTTAACTTCAGAACTCAGAAGAACCAAGATATGCTGGATTTTTTTAAATGTTATTTTACTGAAGAATTATCTGAGCTCTGTTATTGGGATTAGGGCACACTACAATGTGGTTTTGAAGGATGTGGAGGTCGATGGGGATCTTCTAGAGCTTCCTTTAGATATATTTGACTCCGGAAATGGGAGGGGGACAATAATAGATAGTGGCACAACCTTGGCTTACCTTCCACCTATGATTCATAGCCAGATAGTGGCGAAGGTTTTGGCTCGGCAGCCTACACTGAAATTATATCTTGTCGATGAAGAATTTACCTGTTTTCATTATAGTGACAAGTTAGATGATGGATTTCCACTTGTCAAGTTTCACTTTGAGGGAATTTCTTTAATAGCTTATCCACACGACTACATGTTCTTCTATCATGGCGACATGTATTGTATTGGCTGGCAGAAAAGTTCGTCACAAACCAAGGATGGAAAGGACTTGATTCTTCTTGGAGATTTGGTGTTGTCAAACAAATTAGTTGTATACGATCTTGAAAATATGGAAGTTGGATGGACAGATTTCAATTGTTCTTCCAGCATTAAAGTGAAGGATGAAAAGACTAGATCTGTATATGCATTGGGTGCACATAAACTTTCATCAGCTTCTACAGTGTTAATTGGAAGAGTGTTGCCATTCTTTTTGTTGCTTATTGTCATGACAACAATTTAA 1638 0.3968 MDFNLKGMLLLLFILTVELCFGSNANLVLPVERKFIGPHISLSQIKAHDARRHGRFLSGIDIELGGNGLPSKTGLYYTKIGLGSPAKDYYVQVDTGSDVLWVNCEGYTTIAFTAVANNCEKMCVVHDRNCSCNAAVEIYRNCNVVIVDCDIELHLYNSKDSNTSEVVPCNGDFCQATYGGEISDCKKGKSCPYSIIYGDGGQTTGSFVRDLLTFNRVNGNLRTGPDSSSVIFGCGTNQSGTLGKSEDDALCGIMGFGQSNSSVLSQLAASGKVKKVFSHCLDTIQGGGIFSIGEVVQPKFNRTSLLFDCYLTSELRRTKICWIFLNVILLKNYLSSVIGIRAHYNVVLKDVEVDGDLLELPLDIFDSGNGRGTIIDSGTTLAYLPPMIHSQIVAKVLARQPTLKLYLVDEEFTCFHYSDKLDDGFPLVKFHFEGISLIAYPHDYMFFYHGDMYCIGWQKSSSQTKDGKDLILLGDLVLSNKLVVYDLENMEVGWTDFNCSSSIKVKDEKTRSVYALGAHKLSSASTVLIGRVLPFFLLLIVMTTI 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1351 545 Pfam Xylanase inhibitor C-terminal 343 495 IPR032799 -
Lal2g1351 545 CDD pepsin_A_like_plant 76 499 IPR034161 -
Lal2g1351 545 PANTHER ASPARTYL PROTEASES 8 115 IPR001461 GO:0004190|GO:0006508
Lal2g1351 545 PANTHER ASPARTYL PROTEASES 327 516 IPR001461 GO:0004190|GO:0006508
Lal2g1351 545 PANTHER ASPARTYL PROTEASES 151 307 IPR001461 GO:0004190|GO:0006508
Lal2g1351 545 PRINTS Pepsin (A1) aspartic protease family signature 82 102 IPR001461 GO:0004190|GO:0006508
Lal2g1351 545 PRINTS Pepsin (A1) aspartic protease family signature 373 384 IPR001461 GO:0004190|GO:0006508
Lal2g1351 545 PRINTS Pepsin (A1) aspartic protease family signature 471 486 IPR001461 GO:0004190|GO:0006508
Lal2g1351 545 Gene3D Acid Proteases 329 505 IPR021109 -
Lal2g1351 545 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 8 115 - -
Lal2g1351 545 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 327 516 - -
Lal2g1351 545 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 151 307 - -
Lal2g1351 545 SUPERFAMILY Acid proteases 71 503 IPR021109 -
Lal2g1351 545 Pfam Xylanase inhibitor N-terminal 76 293 IPR032861 -
Lal2g1351 545 Gene3D Acid Proteases 68 294 IPR021109 -
Lal2g1351 545 ProSiteProfiles Peptidase family A1 domain profile. 76 495 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1351 Lal-Chr2 11402982 11409526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1351 58 505 Miscellaneous Gene Families AT1G44130 21.645 1.15e-20 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1351 - - gmx:100779846 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1351 2 11402982 11409526 Lal6g1004 6 7151188 7154932 LSH