Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0966 ATGTCAGAAACTGACATGGCAGATATCGAACCTGAGATGATGAAGCCCTATATCTGGCTTCAGACTTCTGATGGCTCAATCCAACAAGTCGAACAAGAAATTGCAATGTTTTGCCCTGTAATATCTCAAGAAATAATACAAAAGGGCATGGGATCTTCCAAGAGTTGTGCAATATGTCTTCCTCAACAAGTCAATCCTGCAATGTTGAGCTTAGTTCTTGATTATTGTCGATTCCATCAAGTACCAGGCCGCTCCAATAAGGAACGAAAGTCTTATGATGAAAAATTCATTAGGATGGATACAAACAGGCTATGTGAATTGACGTCTGCAGCGGATAGCTTAAAGTTGAAGCCGTTGGTCGATCTTACCAGTCGTGCACTTGCTCGAATAATCGAAGGAAAAACACCAGAGGAGATACGTGATATATTTCACATTCCCGATGATCTTACAGAGGAAGAAAAGTTGGAGCCCTTGAGGAACATAACTGATGACCCAAGGATTAGACTTTTGAATCGTTTGTATGCCAAAAAGAGGAAAGAATTAAAAGAACGTGAAAAGTTGAAGAATGCTGAAGCTGAAAGAGAGCGTATAGATGAACGTTCAGTTGATGACCTTTTGTCTTTTATTAATGGAAAGGAATCAGATAGAAAGGCGAATAAAACTTCCAAAAATAAAAAGAAGAACAGGAAGAAAAAAGAGCAACTGAAGAACTCTTCTCTGAAAGAACCATCTGAACTGAATAAGGAGGCTGTTGAGGTAAATGGCCGTGATACCAGACAAGAAAGTTCTGAAGCAGTTAGAATTGGCCAGACATCAAATTTAGACTATACAGAAGATGGCACTTTTTTTGATATTGTTGATTTTGATGATGAAGATATGGATGATGAGATTGATCCTGCATTGAAGGAAAAAATCGACAGGGAAGTGGAAGATTTTGCTCGCCGACTGAATTCTAACTGGCCAGAGAGGATGCAAGACTTTTTATCACCAGGGCGAGAAAGGAAGACAACACTTCTCACTTCCGACAGGACTGGCTTTCTAAGTCGACATGCATGA 1056 0.3977 MSETDMADIEPEMMKPYIWLQTSDGSIQQVEQEIAMFCPVISQEIIQKGMGSSKSCAICLPQQVNPAMLSLVLDYCRFHQVPGRSNKERKSYDEKFIRMDTNRLCELTSAADSLKLKPLVDLTSRALARIIEGKTPEEIRDIFHIPDDLTEEEKLEPLRNITDDPRIRLLNRLYAKKRKELKEREKLKNAEAERERIDERSVDDLLSFINGKESDRKANKTSKNKKKNRKKKEQLKNSSLKEPSELNKEAVEVNGRDTRQESSEAVRIGQTSNLDYTEDGTFFDIVDFDDEDMDDEIDPALKEKIDREVEDFARRLNSNWPERMQDFLSPGRERKTTLLTSDRTGFLSRHA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0966 351 Gene3D Potassium Channel Kv1.1; Chain A 12 161 IPR011333 -
Lal6g0966 351 PANTHER SKP1-LIKE PROTEIN 20 1 277 - -
Lal6g0966 351 SUPERFAMILY Skp1 dimerisation domain-like 90 159 IPR036296 GO:0006511
Lal6g0966 351 Coils Coil 218 238 - -
Lal6g0966 351 Pfam Skp1 family, dimerisation domain 117 154 IPR016072 GO:0006511
Lal6g0966 351 PANTHER SKP1 1 277 IPR016897 GO:0006511
Lal6g0966 351 Pfam Skp1 family, tetramerisation domain 17 80 IPR016073 GO:0006511
Lal6g0966 351 MobiDBLite consensus disorder prediction 235 263 - -
Lal6g0966 351 MobiDBLite consensus disorder prediction 211 271 - -
Lal6g0966 351 Coils Coil 170 200 - -
Lal6g0966 351 SMART skp1_3 15 116 IPR001232 GO:0006511
Lal6g0966 351 SUPERFAMILY POZ domain 16 80 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0966 Lal-Chr6 6826753 6833163 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0966 - - gmx:100794666 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0966 6 6826753 6833163 Lal6g0966 6 6826753 6833163 ECH
Lal6g0966 6 6826753 6833163 Lal18g0722 18 8145590 8151129 ECH
Lal6g0966 6 6826753 6833163 Lal22g0844 22 6359705 6367900 LSH
Lal6g0966 6 6826753 6833163 Lal18g0722 18 8145590 8151129 LSH
Lal6g0966 6 6826753 6833163 Lal6g0966 6 6826753 6833163 PCT
Lal6g0966 6 6826753 6833163 Lal22g0844 22 6359705 6367900 PCT
Lal6g0966 6 6826753 6833163 Lal18g0722 18 8145590 8151129 PCT
Lal22g0844 22 6359705 6367900 Lal6g0966 6 6826753 6833163 PCT
Lal18g0722 18 8145590 8151129 Lal6g0966 6 6826753 6833163 PCT