Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0722 ATGGACAACCGTGACAGAATGACTGAACAACGAGATTACTCAGAGTTATTGGACAAAGAAGAAGGGGAGAGTTTAATGATGAAACCGTATATCTGGCTTCAGACTTCTGATGGTTCAATCCAACAAGTGGAACAAGAAATTGCAAAGTTTTGCCCTCTAATATGTCAAGAAACAATGCAAAACGGCATGGGATCTTCCAAGAATTGTGCAATATGTCTTCCTCAACAAGTCAATCCTGCCATGTTGAGCATAGTTCTTGATTATTGTCGATTTCATCAATTACCAGGCCGCTCAAATAAGGAACGAAAGTCTTATGATGAGAAACTCATTAGGATGGATACAAACAGGCTATGTGAATTGACGTCTGCAGCGGATAGCTTAAAGTTGAGGCCATTGGTTGATCTTACGAGTCGTGCACTTGCTCGAATAATTGAAGGAAAAACTCCTGAAGAGATACGTGATATATTTCACATTCCTGATGATCTTACAGAGGAAGAGAAGTTGGAGCCATTGAGAAACATAACTGATGACCCAAGGATCAGACTTTTGAATCGTTTGTATGCCAAAAAGAGGAAAGAACTAAAAGAACGTGAAAAGTTGAAGAGTGTTGATGCTGAAGAGCGTGTAGATGAGCGTTCACTTGATGACCTTTTGTCTTTTATTAATGGAAAGGAATCAGATCAAAAGCGGAATAAAACTTCCAAAAATAAAAAGAAGAACCGAAAGAAAAAAGAGCAACAGAAGAACTCTTCTCCGAAAGATGCTTCTGACCTGAATAAGAAGGAGGTAAATGAGCATAATACCAGACCCGCAAGTTCTGAAGCAGTTAGAATTGGGCAGACCTCAAATTTAGACTATACAGAAAATCGCACTTTCATTGATAATGTTGAGTTTGATGATGAAGATATAGATGATGAGATCGATCCTGAATTGAAGGAAAAAATTGATAGGGAAGTGGAAGATTTTGCCCGCCGATTGAATTCTAATTGGCCAGAGAGGATGCAAGACTTTTTATCATCCGGGCGAGAAAGGAAGACAACACTTTTTACTTCCGACAGGACTGGCTTTCTTAGTCGACATGCATGTATGACTGGACTCAGAATGAAAATGAATGCTTACAAACTTACCCAAATGGAAAATGGCTTGAACAGTTTTGAGAGATGCTGA 1167 0.3907 MDNRDRMTEQRDYSELLDKEEGESLMMKPYIWLQTSDGSIQQVEQEIAKFCPLICQETMQNGMGSSKNCAICLPQQVNPAMLSIVLDYCRFHQLPGRSNKERKSYDEKLIRMDTNRLCELTSAADSLKLRPLVDLTSRALARIIEGKTPEEIRDIFHIPDDLTEEEKLEPLRNITDDPRIRLLNRLYAKKRKELKEREKLKSVDAEERVDERSLDDLLSFINGKESDQKRNKTSKNKKKNRKKKEQQKNSSPKDASDLNKKEVNEHNTRPASSEAVRIGQTSNLDYTENRTFIDNVEFDDEDIDDEIDPELKEKIDREVEDFARRLNSNWPERMQDFLSSGRERKTTLFTSDRTGFLSRHACMTGLRMKMNAYKLTQMENGLNSFERC 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0722 388 MobiDBLite consensus disorder prediction 247 268 - -
Lal18g0722 388 Pfam Skp1 family, tetramerisation domain 30 93 IPR016073 GO:0006511
Lal18g0722 388 SUPERFAMILY POZ domain 29 93 IPR011333 -
Lal18g0722 388 SUPERFAMILY Skp1 dimerisation domain-like 104 171 IPR036296 GO:0006511
Lal18g0722 388 MobiDBLite consensus disorder prediction 221 281 - -
Lal18g0722 388 Gene3D Potassium Channel Kv1.1; Chain A 25 174 IPR011333 -
Lal18g0722 388 Pfam Skp1 family, dimerisation domain 131 167 IPR016072 GO:0006511
Lal18g0722 388 PANTHER SKP1-LIKE PROTEIN 20 24 289 - -
Lal18g0722 388 PANTHER SKP1 24 289 IPR016897 GO:0006511
Lal18g0722 388 SMART skp1_3 28 129 IPR001232 GO:0006511
Lal18g0722 388 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0722 Lal-Chr18 8145590 8151129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0722 - - gmx:100794666 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0722 18 8145590 8151129 Lal18g0722 18 8145590 8151129 ECH
Lal6g0966 6 6826753 6833163 Lal18g0722 18 8145590 8151129 ECH
Lal6g0966 6 6826753 6833163 Lal18g0722 18 8145590 8151129 LSH
Lal22g0844 22 6359705 6367900 Lal18g0722 18 8145590 8151129 LSH
Lal6g0966 6 6826753 6833163 Lal18g0722 18 8145590 8151129 PCT
Lal18g0722 18 8145590 8151129 Lal6g0966 6 6826753 6833163 PCT