Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0965 ATGGTTTCACATGTAGCTTCTATATACACTGTGGCATCAATGTTCCTGTTTTCTTTCACCTTGGTCTTGTCTGGTGATATAGTTCACCATGATGATGTTGCTCCTACTAGACCTGGTTGTGCCAATAACTTTGTTCTGGTCAAAGTCCCAACTTATGTTGATGGTGTGGAAAACAGTGAGTATGTTGGTGTTGGTGCAAGGTTTGGCCCTACATTGGAATCGAAGGAAAAACGTGCTAACCACACTAGAGTTGTCTTGGCTGATCCTCCTGATTGTTGTAGCAAGCCTAAGAATAAGCTCACCAGCGAGATCATTTTGGTGCACCGGGGAAAATGTAGTTTCACAACCAAGGCAAACATAGCTGACGACGCCGGCGCTTCAGCCATCATCATTATAAACAACCAAACAGAACTTTTCAAGATGGTTTGTGAAGTTAATGAAACTGATGTTAATATTGGAATACCTGCTGTCATGCTTCCACAAGATGCTGGAATAAACTTGGAAAAGCATATAAAGAACAACTCCATCGTGTCCATACAGTTATACTCTCCACACCGTCCATTGGTTGATGTTGCGGAAGTATTTTTGTGGCTTATGGCTGTTGGAACCATTTTATGTGCTTCTTATTGGTCTGCCTGGACTGCCAGAGAAGCAGCTATTGAGCAAGAGAAGCTTTTAAAGGATGGTTCGGATGAATATGTTAATACAGAGAATGTTGGTTCCAGTGGCTATGTGGAAATCAGTACTGCAGCAGCAATTTTATTTGTTCTGTTTGCTTCTTGCTTCTTGGTTATGCTCTACAAATTAATGTCATACTGGTTTGTTGAAATTTTGGTGGTTCTATTTTGCATCGGTGGAATAGAGAAGCTAATTAAGCTAACTATTTATATTCTTCACGTGCTTTCAGGGACTGCAAACTTGTTTGGTGGCTCTGTTATCATGCAAAATGATTGTAGTTTCAGATGGTTTCAACATGCTGCACAAACATTTGTGAAGATACCTTTCTTTGGAGTTGTCCCATATCTTGCACTTGCTGTTACTCCTTTCTGCATAGTGTTTGCTGTGATTTGGGCAGTTTATCGCCGTGTATCGTATGCTTGGATTGGTCAAGATATTCTTGGTATCACATTGATAATTACAGTTCTTCAGATCGTCCGCATACCAAATCTCAAGGTTGGAACTGTTCTTCTCAGTTGTGCTTTCTTATATGATATCTTCTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTCATGATAGTGGTAGCTCGAGGTGATAAGAGTGGAGAAGACGGCATCCCCATGCTACTCAAGATACCGCGTTTGTTTGATCCTTGGGGTGGTTACAGCATCATTGGTTTTGGGGACATACTCTTACCAGGGCTTCTAGTAGCATTTTCACTCAGGTATGATTGGTTGGCAAAGAGGAACCTCCGGGCTGGATACTTCTTGTGGGCAATGACTGCTTATGGTTTAGGTCTCTTTGTAACATATGTAGCTTTGAACTTGATGGATGGGCATGGCCAACCAGCTTTGCTCTATATAGTTCCATTTACACTTGGTACATTTTTGTCTTTGGGAATGAAAAGAGGTGAACTCAAGATTTTATGGACAAGAGGAGAACCAGAATGGGTTTGTCCTCATATACAAGAGGATCACCAACCAATTAACCATTGA 1680 0.4131 MVSHVASIYTVASMFLFSFTLVLSGDIVHHDDVAPTRPGCANNFVLVKVPTYVDGVENSEYVGVGARFGPTLESKEKRANHTRVVLADPPDCCSKPKNKLTSEIILVHRGKCSFTTKANIADDAGASAIIIINNQTELFKMVCEVNETDVNIGIPAVMLPQDAGINLEKHIKNNSIVSIQLYSPHRPLVDVAEVFLWLMAVGTILCASYWSAWTAREAAIEQEKLLKDGSDEYVNTENVGSSGYVEISTAAAILFVLFASCFLVMLYKLMSYWFVEILVVLFCIGGIEKLIKLTIYILHVLSGTANLFGGSVIMQNDCSFRWFQHAAQTFVKIPFFGVVPYLALAVTPFCIVFAVIWAVYRRVSYAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDILLPGLLVAFSLRYDWLAKRNLRAGYFLWAMTAYGLGLFVTYVALNLMDGHGQPALLYIVPFTLGTFLSLGMKRGELKILWTRGEPEWVCPHIQEDHQPINH 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0965 559 SUPERFAMILY PA domain 100 139 IPR046450 -
Lal6g0965 559 SMART psh_8 243 531 IPR006639 GO:0004190|GO:0016021
Lal6g0965 559 PANTHER SIGNAL PEPTIDE PEPTIDASE 7 558 IPR007369 GO:0004190|GO:0016021
Lal6g0965 559 Pfam PA domain 90 166 IPR003137 -
Lal6g0965 559 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 7 558 - -
Lal6g0965 559 Gene3D - 42 185 - -
Lal6g0965 559 Pfam Signal peptide peptidase 244 542 IPR007369 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0965 Lal-Chr6 6817990 6825795 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0965 K09597 - gmx:100795197 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0965 6 6817990 6825795 Lal6g0965 6 6817990 6825795 ECH
Lal6g0965 6 6817990 6825795 Lal22g0843 22 6351298 6358578 LSH
Lal6g0965 6 6817990 6825795 Lal18g0726 18 8233443 8242764 LSH
Lal6g0965 6 6817990 6825795 Lal6g0965 6 6817990 6825795 PCT
Lal6g0965 6 6817990 6825795 Lal22g0843 22 6351298 6358578 PCT
Lal6g0965 6 6817990 6825795 Lal18g0726 18 8233443 8242764 PCT
Lal22g0843 22 6351298 6358578 Lal6g0965 6 6817990 6825795 PCT
Lal18g0726 18 8233443 8242764 Lal6g0965 6 6817990 6825795 PCT