Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0726 ATGTGTGCTTTTTTTAACATATTTGATCAATTTTGTCAAGTCAAAGTCCCCACTTATGTTGATGGTGTGGAAAACAATGAGTATGTTGGTGTTGGTGCAAGATTTGGCCCTACATTGGAATCGAAAGAAAAACGTGCTAACTACACTAGAGTTGTCTTGGCTGACCCTCCTGATTGTTGTACCAAGCCTGTGAATAAGCTCACCAGCGAGATCATTTTGGTTCACCGAGGAAAATGTAGTTTCACAACCAAGGCAAACATAGCTAAAGACGCTGGCGCTTCAACTATCATCACTATAAACAACCAAAGAGAACTTTTCAAGATGGTTTGTGAAGATAATGAAACTGATGTTAATATTGGAATACCTGCTGTCATGCTTCCACAAGATGCTGGAATAAACTTGGAAAAGCATATAAGAAACAACTCCATAGTGTCCATACAGTTATACTCTCCACACCGACCATTGGTCGATGTTGCGGAAGTGTTTTTGTGGCTTATGGCTGTTGGAACCATTTTATGTTCTTCTTATTGGTCTGCCTGGACTACCAGAGAAGCAGCTATTGAGCAAGAGAAGCTTTTAAAGGATGGTTCAGATGAATATGTTAATACAGAGAATGTTGGTTCGAGTGGTTATGTGGAAATCAGTACTGCAGCAGCAATTTTATTTGTTCTGTTCGCTTCTTGCTTCTTGGTTATGCTATACAAATTTATGTCATACTGGTCTGTTGAAATTTTAGTGGTACTATTTTGCATCGGTGGGATTGCAAACTTATGCTTTCAACATGCTGCACAAACATTTGTGAAGATACCTTTCTTTGGAGCTGTTCCATATCTTGCACTTGCTGTTACTCCCTTCTGCATTGTGTTTGCTGTGGTTTGGGCAGTTTATCGCCGTGTATCGTATGCTTGGATTGGTCAAGATATTCTTGTACGAATAATTGTCCGCATACCAAACCTCAAGTTGGAACTGTTCTTCTCAGCTGTGCCTTTCTATATGACATTGTCTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTAACTCGAGGTGATAAGAGTGGAGAAGATGGTATCCCCATGTTACTCAAGATTCCACGTTTGTTTGATCCTTGGGGTGGTTACAGCATCATTGGTTTTGGGGACATACTCTTACCGGGGCTTCTAGCAAATAAGAACCTCCGTGCTGGATACTTCTTATGGGCAATGACTGCTTATGGTTTAAGTCTGTTTGTTACATATGTGGCCTTAAACTTGATGGATGGGCATGGCCAACCAGCTCTGCTTTATATAGTCCCATTTATACTTGGCACCTTTTTATTGTTGGGAATGAAGAGAGGTGAGCTGAAGATTTTATGGACAAGAGAAGAGCCAGAGAGAGCTTGTTCTCATATACAACAAGAGGATCAACAATCAATTAACCATTGA 1425 0.4049 MCAFFNIFDQFCQVKVPTYVDGVENNEYVGVGARFGPTLESKEKRANYTRVVLADPPDCCTKPVNKLTSEIILVHRGKCSFTTKANIAKDAGASTIITINNQRELFKMVCEDNETDVNIGIPAVMLPQDAGINLEKHIRNNSIVSIQLYSPHRPLVDVAEVFLWLMAVGTILCSSYWSAWTTREAAIEQEKLLKDGSDEYVNTENVGSSGYVEISTAAAILFVLFASCFLVMLYKFMSYWSVEILVVLFCIGGIANLCFQHAAQTFVKIPFFGAVPYLALAVTPFCIVFAVVWAVYRRVSYAWIGQDILVRIIVRIPNLKLELFFSAVPFYMTLSGCLSLNGGSMRVTRGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDILLPGLLANKNLRAGYFLWAMTAYGLSLFVTYVALNLMDGHGQPALLYIVPFILGTFLLLGMKRGELKILWTREEPERACSHIQQEDQQSINH 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0726 474 PANTHER SIGNAL PEPTIDE PEPTIDASE 10 473 IPR007369 GO:0004190|GO:0016021
Lal18g0726 474 SUPERFAMILY PA domain 67 106 IPR046450 -
Lal18g0726 474 Pfam Signal peptide peptidase 211 456 IPR007369 GO:0004190|GO:0016021
Lal18g0726 474 Gene3D - 4 152 - -
Lal18g0726 474 Pfam PA domain 56 133 IPR003137 -
Lal18g0726 474 SMART psh_8 210 445 IPR006639 GO:0004190|GO:0016021
Lal18g0726 474 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 10 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0726 Lal-Chr18 8233443 8242764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0726 K09597 - gmx:100795197 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0726 18 8233443 8242764 Lal18g0726 18 8233443 8242764 ECH
Lal6g0965 6 6817990 6825795 Lal18g0726 18 8233443 8242764 LSH
Lal22g0843 22 6351298 6358578 Lal18g0726 18 8233443 8242764 LSH
Lal6g0965 6 6817990 6825795 Lal18g0726 18 8233443 8242764 PCT
Lal18g0726 18 8233443 8242764 Lal6g0965 6 6817990 6825795 PCT