Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0843 ATGGTTTCACATGGAGTTTCTATATATACTATGATGTTTCTTTTTGCTTTCACTTTTGCTTTTGCTGGTGATATAGTTCATCATGATGATGTTGCTCCTACAAGGCCTGGTTGTGAGAACAACTTTGTTCTGGTCAAAGTCCCCACTTATGTTGATGGTGTGGAAAACAGTGAGTATGTTGGTGTTGGTGCAAGATTTGGCCCTACATTGGAATCAAAAGAAAAGCGTGCCAGCCATACTAGAGTTGTCTTGGCTGATCCTCCCGATTGTTGTAGCAAGCCTAAGAATAAGCTCACCAGCGAGATCATTTTGGTGCACCGGGGAAAATGTAGTTTCACAACCAAGGCAAATATAGCTGAGGATGCTGGTGCTTCAGCCATCATCATTATAAACAACCAAACAGAACTTTTCAAGATGGTTTGTGAAGATAATGAAACAGATATTAATATTGGAATACCTGCTGTCATGCTTCCACAAGATGCTGGAATAAACTTGGAAAAGCATATACGAAACTACTCCATAGTGTCCATACAGTTATACTCTCCACACCGTCCGTTGGTTGATGTTGCGGAAGTGTTTTTATGGCTTATGGCTGTTGGAACCATTTTATGTGCTTCTTATTGGTCTGCCTGGACTGCCAGGGAAGCAGCTATTGAGCAAGAGAAGCTTTTAAAGGATGCTTCAGATGAATATGTTGGTACAGAGAATGTTGGATCCAGTGGTTATGTGGAAATCAGTACCGGATCAGCAATTTTATTTGTTTTGTTTGCTTCTTGCTTCTTGGTTATGCTCTACAAATTAATGTCATACTGGTTTGTTGAAATTTTGGTGGTTCTGTTTTGCATCGGGACTGCAAACTTGTTTGGTGGCACTGTTATCATGCAAGGTGCTTATAGTTTCAGATGGTTTCAAGATGCTGCACAAACATTTGTGAAGATACCTTTCTTCGGAGCTGTTCCATATCTCGCACTTGCTGTTACACCTTTCTGCATAGTGTTTGCTGTGGTTTGGGCAGTTTATCGCCGTGTATCGTACGCCTGGATTGGTCAAGACATTCTTGGTATCACATTGATAATTACAGTTCTTCAGATTGTCCGCATACCAAATCTCAAGGTTGGAACTGTTCTTCTCAGCCTTGCTTTCTTATATGATATCTTCTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTTATGATAGTGGTCGCTCGAGGTGACAAGAGTGGAGAAGATGGTATCCCCATGCTTCTGAAGATACCGCGTTTGTTTGATCCTTGGGGCGGTTACAGCATCATCGGTTTTGGGGACATACTCTTACCAGGGCTTCTAGTAGCATTTTCACTAAGGTATGATTTGTTGGCGAAGAAGAATCTCCGGGCTGGATACTTTGTGTGGGCAATGACTGCTTATGGTTTAGGTCTCTTTGTCACATATGTGGCCTTAAACTTGATGGATGGGCATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTGGCACATTTTTATCATTGGGAATAAAGAGAGGTGAACTGAAGATTTTATGGAGCAGAGGAGAACCAAAAAGGGCATGTCCTCATATTCAAGATCATCACCAATCACTTAACAATTGA 1620 0.4148 MVSHGVSIYTMMFLFAFTFAFAGDIVHHDDVAPTRPGCENNFVLVKVPTYVDGVENSEYVGVGARFGPTLESKEKRASHTRVVLADPPDCCSKPKNKLTSEIILVHRGKCSFTTKANIAEDAGASAIIIINNQTELFKMVCEDNETDINIGIPAVMLPQDAGINLEKHIRNYSIVSIQLYSPHRPLVDVAEVFLWLMAVGTILCASYWSAWTAREAAIEQEKLLKDASDEYVGTENVGSSGYVEISTGSAILFVLFASCFLVMLYKLMSYWFVEILVVLFCIGTANLFGGTVIMQGAYSFRWFQDAAQTFVKIPFFGAVPYLALAVTPFCIVFAVVWAVYRRVSYAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSLAFLYDIFWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDILLPGLLVAFSLRYDLLAKKNLRAGYFVWAMTAYGLGLFVTYVALNLMDGHGQPALLYIVPFTLGTFLSLGIKRGELKILWSRGEPKRACPHIQDHHQSLNN 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0843 539 Pfam PA domain 88 164 IPR003137 -
Lal22g0843 539 SMART psh_8 241 511 IPR006639 GO:0004190|GO:0016021
Lal22g0843 539 Pfam Signal peptide peptidase 242 522 IPR007369 GO:0004190|GO:0016021
Lal22g0843 539 Gene3D - 38 183 - -
Lal22g0843 539 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 10 538 - -
Lal22g0843 539 SUPERFAMILY PA domain 98 137 IPR046450 -
Lal22g0843 539 PANTHER SIGNAL PEPTIDE PEPTIDASE 10 538 IPR007369 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0843 Lal-Chr22 6351298 6358578 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0843 K09597 - gmx:100795197 907.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0843 22 6351298 6358578 Lal22g0843 22 6351298 6358578 ECH
Lal6g0965 6 6817990 6825795 Lal22g0843 22 6351298 6358578 LSH
Lal22g0843 22 6351298 6358578 Lal18g0726 18 8233443 8242764 LSH
Lal6g0965 6 6817990 6825795 Lal22g0843 22 6351298 6358578 PCT
Lal22g0843 22 6351298 6358578 Lal6g0965 6 6817990 6825795 PCT