Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0935 ATGTGTTCACACATTGATCCAGTTTCAACTTCTATGGCAGATGCTAAACAAAGGTATGCTGTTGTTACAGGTTCAAACAAAGGGATAGGATTGGAAACTGTGAAAGGTTTGGCCTCAAATGGAGTTAAGGTTGTGTTAACAGCTAGAGATGAGAAAAAGGGTTATGAAGCTTTGAAGAAATTGAAAGACTTTGGTTTATCTGAATTTGTGGTTTTTCATAAACTTGATGTGACTGATTCTGCTAGTGTTGCATCTTTAGTTGAATTTGTTAAGGTTCAGTTTGGGAGACTTGATATTTTGGTGAACAATGCAGGAATCACTGGGTTCAATGCAGATGACTTGGTAGGATCGAAAATTAACTGGAGGGAGCTGCCTCAAACTTACGAAATGGCCGAAAAGTGCCTAACAACAAACTATTATGGTGCTAAGGAAACAACTAAAGCATTTCTTCCGCTTCTTCAGCAGTCCAATTCACCTCATATTGTTAATGTTTCCTCCACGGCAGGGTTATTAAAGCACATATCAAACGAATGGGCTAAAGGGGTGCTTGATGATACTGAAAATCTTACAGAAGAGAGAATAGAAAAGGTACTGAAGGAGTTTATGAAAGACTTCAAAGAAGGTTCACTAAAAAACAAAGGTTGGCCAACATATTTGTCTACCTATATGGTCTCAAAAGCAGCCTTGAATACTTACACAAGGCTTCTAGCGAAGAAGCACGAAAACTTTTGCATAAATTGTGTGTGCCCTGGTTTTGTGAAAACAGACATTAATAGAAACACAGGCATCTTATCTGTTGAAAATGGTGCTGCTAGTGTTGTGAGATTAGCATTGCTTCCCAACGGTTCTGCTTCTGGTAATTTCTTCGCTCGTCAAGAAGTATCAGGATTTTGA 894 0.3859 MCSHIDPVSTSMADAKQRYAVVTGSNKGIGLETVKGLASNGVKVVLTARDEKKGYEALKKLKDFGLSEFVVFHKLDVTDSASVASLVEFVKVQFGRLDILVNNAGITGFNADDLVGSKINWRELPQTYEMAEKCLTTNYYGAKETTKAFLPLLQQSNSPHIVNVSSTAGLLKHISNEWAKGVLDDTENLTEERIEKVLKEFMKDFKEGSLKNKGWPTYLSTYMVSKAALNTYTRLLAKKHENFCINCVCPGFVKTDINRNTGILSVENGAASVVRLALLPNGSASGNFFARQEVSGF 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0935 297 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 15 297 - -
Lal6g0935 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 283 IPR036291 -
Lal6g0935 297 Gene3D - 9 297 - -
Lal6g0935 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 IPR002347 -
Lal6g0935 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 167 IPR002347 -
Lal6g0935 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 222 241 IPR002347 -
Lal6g0935 297 Pfam Enoyl-(Acyl carrier protein) reductase 212 261 - -
Lal6g0935 297 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Lal6g0935 297 PRINTS Glucose/ribitol dehydrogenase family signature 95 106 IPR002347 -
Lal6g0935 297 PRINTS Glucose/ribitol dehydrogenase family signature 153 169 IPR002347 -
Lal6g0935 297 PRINTS Glucose/ribitol dehydrogenase family signature 222 241 IPR002347 -
Lal6g0935 297 PRINTS Glucose/ribitol dehydrogenase family signature 241 258 IPR002347 -
Lal6g0935 297 Pfam short chain dehydrogenase 19 172 IPR002347 -
Lal6g0935 297 CDD carb_red_PTCR-like_SDR_c 18 297 IPR045313 GO:0016616
Lal6g0935 297 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 15 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0935 Lal-Chr6 6509379 6511899 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0935 21 262 Acyl Lipid Metabolism Gene Families AT1G24360 22.672 3.01e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0935 K15095 - gmx:111064653 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0935 6 6509379 6511899 Lal6g0935 6 6509379 6511899 ECH
Lal6g0935 6 6509379 6511899 Lal22g0819 22 6124276 6127099 PCT
Lal6g0934 6 6502005 6507012 Lal6g0935 6 6509379 6511899 PCT
Lal6g0935 6 6509379 6511899 Lal6g0935 6 6509379 6511899 PCT