Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0934 ATGGGAGAAGCTACACAAAGATATGCAGTTGTAACTGGATCAAACAAAGGAATTGGATTAGAGACAGTTAGACAATTAGCTTCAGCTGGAATCAAAGTGGTTCTTACTTCAAGAGATGAAAAGAGAGGTCTTGAAGCATTGCAAAAACTCAATGCTTCAGGTTTATCTCATCTTCTACTCTTTCATCACCTTGATGTTGCTGATCCTGCAAGTGTAGCTTCTCTTGCTCATTTTATTGAATCTAAGTTTGGAAAACTTGACATTCTGGTTAACAATGCAGGTATTGGAGGAGTTGTTTTCGAAGACCATAACATGATCAGTTCAACAATCCTCAATGGCGGGGATTTATCTGAAGATGATGCAAAAAAAGCAGTGACTCAAACTTATGAACTAGCTGAAGAATGCTTGAAAATCAATTATTATGGTGCCAAAATAACTGCTGAATCCCTTCTGCCCCTCCTCCAGAAATCTGATTCACCAAGAATTGTGAACGTATCGTCCACCCTGGGAAAGTTAAAGTATGTATCAAATGAATGGGCTAAAGGAGTCTTGGGTGATGCTAATAACCTTACCGAAGAGAAAGTCGATGAAGTAATTAAGGAGTTTCTCAAAGATTTCAAAGAAGGGGCATTAGAAAGCAAAGGCTGGCCTAGGACTCTGGGTGCCTATATCATTTCTAAAGCTGCTATGAATGCTTATACAAGAATTCTTGCTAAGAATTACCCTACCATATGCATCAATAGTGTTTGCCCTGGTTATGTCAAGACGGATATAACGAGCAATACTGGATTCTTAACAACCGAAGAAGGTGCAGCTAGTCCTGTCAGGTTAGCATTGCTTTCCAAGGGGAGTCCTTCTGGCCTCTTCTACAACCGAACCGAGGTCTCTTCTGATTGGTAA 900 0.4011 MGEATQRYAVVTGSNKGIGLETVRQLASAGIKVVLTSRDEKRGLEALQKLNASGLSHLLLFHHLDVADPASVASLAHFIESKFGKLDILVNNAGIGGVVFEDHNMISSTILNGGDLSEDDAKKAVTQTYELAEECLKINYYGAKITAESLLPLLQKSDSPRIVNVSSTLGKLKYVSNEWAKGVLGDANNLTEEKVDEVIKEFLKDFKEGALESKGWPRTLGAYIISKAAMNAYTRILAKNYPTICINSVCPGYVKTDITSNTGFLTTEEGAASPVRLALLSKGSPSGLFYNRTEVSSDW 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0934 299 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Lal6g0934 299 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Lal6g0934 299 PRINTS Glucose/ribitol dehydrogenase family signature 154 170 IPR002347 -
Lal6g0934 299 PRINTS Glucose/ribitol dehydrogenase family signature 223 242 IPR002347 -
Lal6g0934 299 PRINTS Glucose/ribitol dehydrogenase family signature 242 259 IPR002347 -
Lal6g0934 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 281 IPR036291 -
Lal6g0934 299 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 296 - -
Lal6g0934 299 PANTHER SALUTARIDINE REDUCTASE-LIKE 1 296 - -
Lal6g0934 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Lal6g0934 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 IPR002347 -
Lal6g0934 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 223 242 IPR002347 -
Lal6g0934 299 Gene3D - 3 298 - -
Lal6g0934 299 Pfam short chain dehydrogenase 8 175 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0934 Lal-Chr6 6502005 6507012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0934 2 263 Acyl Lipid Metabolism Gene Families AT1G24360 22.677 4.27e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0934 K15095 - gmx:100801677 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0934 6 6502005 6507012 Lal6g0934 6 6502005 6507012 ECH
Lal6g0934 6 6502005 6507012 Lal22g0818 22 6118713 6122593 LSH
Lal6g0934 6 6502005 6507012 Lal6g0935 6 6509379 6511899 PCT
Lal6g0934 6 6502005 6507012 Lal6g0934 6 6502005 6507012 PCT
Lal22g0818 22 6118713 6122593 Lal6g0934 6 6502005 6507012 PCT