Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0653 ATGGAGAATCAAGAAGAGTACACAGACAAAGTGATAGAGGAATTTGAGGTACTTACAAAGGATGCTGAGAGGGTTCAGAGGGAAGTACTGAAAAGCATTTTGGAAGAGAATGCATCAGCAGAATACTTGCAGAGTTTAGGACTCAATGGAAGGACTGACCCTGAAAGTTTCAAGGCATGTGTCCCACTGGTCACTCATGACGACTTGCTGCCTTATATCAACAGAATCTTTGATGGAGAAAATTCTCCTATTCTCACTGGAAAACCCATCACAGCCATGTCTTTCAGGTCTCACCCTCATCCATTTCTGGCACTACTAAAGCTGTGGGATAATCTTAGATCAGCCTTGGCACAAATCACAATGGTTAAATATGTTACCATAGAGTTCCCCATAAAAAATGGCATGGCCTTAACCTTTAACTACAGCAGTAAGCAATCCCAAACAAAAGGAGGTATAAAAATAGGTTCTGCAACAAGCCATTTGTTCAGACACGAAGGGTACACCGACGGAGAGGACGACTCACAATCTTGCAGCCCTGAGGAAGTAATATTTTGTTCCGATTTCCAGCAATCATTGTACTGCCACCTCTTGTGTGGCCTAATTTTCAAGGACCAAGTTCAGTTTGTGTCTGCACCATTTGCACATAGCATTGTCCAAGCTTTTAGCACTTTTGAACAAGTGTGGGAAGAGCTATGTAATGATATTAGGGAAGGTGTCCTGAGCAGCAAAATCACAGACCCATCGATCAGGACTGCAATGTCTAAAATTCTCAAACCAGACCCTGAGCTAGCCAACTTGATCCACAAAAAATGCACAGGGTTGAGCAACTGGTATGGGGTGATACAAGAGCTTTTCCCAAATGCTAAGTATCTGTTTGCTATCATGACTGGGACAATGGAGACATATTTGCAAAGGTTAAGGCATTATGCTGGTGATTTGCCTTTGGTGACTTCTGATTATGCCTCTTCTGAAGGGTGGATAGCAACAAATTTGCACCCAAAAGTTCCTCCTGAGTTAGCTACTTACACTGTGTTTCCACAAATTGCATACTTTGAATTCATCCCTCTGTCAGAGGATCCTAAGCCAGTGAGCCTAACTGAAGTGAAGGTTGGTGAGGAGTATGAGATTGTTATGACTACTAGAACAGGGTTATACAGGTATAAACTAGGAGATGTGGTGAAGGTTACAGGGTTCTATAACTCAACTCCAGAACTCAAATTCATTCGTCGGAGTAACGTTTTGCTTACGGTTAACATTGACAAGACCACAGAGAATGATTTGTATTTATCTGTGGTTGCAGCATCCAAATTGTTAGAAGAGAAGAAACTATATGTTGTTGATTACACTAGCTATGTTGATTTTTCCAAAGAACCAGGACACTATGTTATATTCTGGGAAATCAGTGGTGAAGCAAGTGAAGAAGTGCTTGGTGAGTGCTGCAATTGTTTAGACAAGTCTTTTGTTGATCCTGCATATGTCTATTCCCGCAAAGCCAACCACATTGGGCCCCTTGAACTCCGAGTTGTTAAGAGAGGAACATTCCAGAAGATTCCTGAGCTTTTCGTTGAAGTGGGGGCTTCTGTTAGTCAGTTCAAGATACCTAGATGTGTGCCCCCTGCTAACACCAAACTCTTGCAAATATTGAATGCAAATGTTGACAAAAACTATATCAGTGCTGCTTTCAATTGA 1689 0.418 MENQEEYTDKVIEEFEVLTKDAERVQREVLKSILEENASAEYLQSLGLNGRTDPESFKACVPLVTHDDLLPYINRIFDGENSPILTGKPITAMSFRSHPHPFLALLKLWDNLRSALAQITMVKYVTIEFPIKNGMALTFNYSSKQSQTKGGIKIGSATSHLFRHEGYTDGEDDSQSCSPEEVIFCSDFQQSLYCHLLCGLIFKDQVQFVSAPFAHSIVQAFSTFEQVWEELCNDIREGVLSSKITDPSIRTAMSKILKPDPELANLIHKKCTGLSNWYGVIQELFPNAKYLFAIMTGTMETYLQRLRHYAGDLPLVTSDYASSEGWIATNLHPKVPPELATYTVFPQIAYFEFIPLSEDPKPVSLTEVKVGEEYEIVMTTRTGLYRYKLGDVVKVTGFYNSTPELKFIRRSNVLLTVNIDKTTENDLYLSVVAASKLLEEKKLYVVDYTSYVDFSKEPGHYVIFWEISGEASEEVLGECCNCLDKSFVDPAYVYSRKANHIGPLELRVVKRGTFQKIPELFVEVGASVSQFKIPRCVPPANTKLLQILNANVDKNYISAAFN 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0653 562 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 5 562 - -
Lal6g0653 562 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 5 562 IPR004993 -
Lal6g0653 562 Pfam GH3 auxin-responsive promoter 14 537 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0653 Lal-Chr6 4262571 4265038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0653 5 559 EF-hand Containing Proteins AT1G23160 37.955 4.86e-128 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0653 K14506 - gmx:100813492 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0653 6 4262571 4265038 Lal6g0653 6 4262571 4265038 ECH
Lal6g0653 6 4262571 4265038 Lal22g0593 22 4167190 4171793 LSH
Lal6g0653 6 4262571 4265038 Lal18g0280 18 2294550 2299477 LSH
Lal18g0280 18 2294550 2299477 Lal6g0653 6 4262571 4265038 PCT
Lal6g0653 6 4262571 4265038 Lal18g0280 18 2294550 2299477 PCT