Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0280 ATGTTAGAGAGAGTGGAAGAGTTTAACTTCAACATGGACAAAGTGGTTGATGAATTTGAGTCACTTACAAAGGATGCAGAAAGGGTTCAAAGGGAAACACTCAAAAAGATTTTGGAGGATAATGCATCTGCAGAGTATTTGCAGAACTTAGAACTCAATGGAAGAACTGACCCTGAGAGTTTCAAGGCATGTATACCATTGGTTACTCACAAAGATTTGGAGCCTTATATATATAGAATTGTTGATGGTGATGCTGCTTCTATTCTCACTGGAAAACCTATCACAACTATCTCTTTAAGCTCTGGCACTACTCAGGGGAAGCCAAAATATGTACCATGGAATGATGAATTGTTTGAAACTACAATGCAGATATATCAGACCTCTTTTGCCTTTAGGAACAGAGAGTATCCTATAAAAAATGGGAAGGCATTAAATTTCATATACAGCAGCAAACAGTTCAAAACAAAAGGGGGTCTCTTAGCAGGAACTGCTACAACCAATGTGTTCCGTAATGTGAGTTACAAATGCGGAATGAAAGCTCTTCAATCGCAATGTTGCAGCCCGGACGAGGTGATATTCGGTCCTGATTTTTACCAATCACTCTACTGCCATCTATTATGTGGCCTAATTTTTAGAGATGAAGTACAATTAGTATCATCAACATTTGCACATAGCATTGTGCATTCTTTTAGAACCTTTGAACAAGTTTGGGAAGATCTATGTACTGATATAAGAGAAGGGGTTCTAAACAGCAAGGTCACTGTTCCATCGATCCGAACTGCCATGTCTAAAATTCTGAAACCAAATCCAGAATTAGCTAACTTGGTACACAAGAAATGTTTGAAGTTAAGCAATAATTGGTATGGTTTGATACAAGAAATATTTCCTAATGCTAAATATGTTTATGGCATAATGACTGGGTCAATGGAGCCTTATTTGAAAAAGTTAAGGCACTATGCTGGTGAGTTACCTTTGTTAACTGCTGATTATGGATCCTCTGAAGGGTGGATAGGTGCAAATGTTAATCCAAAACTTGCACCTGAAATGGCTACTTATGCTGTTCTTCCTCAGATTGGTTACTTTGAATTCATTCCTCTAAATGAGATTGAACTAAGTATTGATCCTAAGCCACTTGGACTCACTGAAGTGAAGGTTGGTGAAGAGTATGAAATTGTTATCACCAATCCTGCAGGTTTATATCGTTATAGGTTAGGGGATGTAGTGAAAGTTATGGGGTTCCATAACTCAAGTCCAGAACTGAAGTTCATTAGAAGGAGTAGTCTTCTACTTACTATCAACATTGACAAGAACACAGAAAAAGATCTACAGTTAGCAGTTGAAGCAGCAACAAGGTTGTTAGCAGAACAAAAACTAGAAATTGTTGACTTCACTAGCCATGTTGACTTGTCAAAAGAACCAGGGCACTATGTTATATTCTTTGAAATGAGTGGTGAAGGAAGTGAAGAATTGCTTAGTGAATGTTGCAATTGTTTAGACAAATCTTTTGTTGATGCTGGGTATGTAAGTTCTAGGAAAGTGAAATTGATTGAAGCACTTGAACTAAGAGTTGTTAAGAGTGGAACATTCCAGAAGATTCTTGATCATTATCTTGGATTAGGAGCTGCTGTTAGTCAATATAAGACACCAAGATGTGTGGGTCCTACAAATACCAAAGTGTTGCAAATCTTGACTGAAAATGTTGTTCACAATTATCTTAGTACTGCTTTCAATTGA 1734 0.3731 MLERVEEFNFNMDKVVDEFESLTKDAERVQRETLKKILEDNASAEYLQNLELNGRTDPESFKACIPLVTHKDLEPYIYRIVDGDAASILTGKPITTISLSSGTTQGKPKYVPWNDELFETTMQIYQTSFAFRNREYPIKNGKALNFIYSSKQFKTKGGLLAGTATTNVFRNVSYKCGMKALQSQCCSPDEVIFGPDFYQSLYCHLLCGLIFRDEVQLVSSTFAHSIVHSFRTFEQVWEDLCTDIREGVLNSKVTVPSIRTAMSKILKPNPELANLVHKKCLKLSNNWYGLIQEIFPNAKYVYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIGANVNPKLAPEMATYAVLPQIGYFEFIPLNEIELSIDPKPLGLTEVKVGEEYEIVITNPAGLYRYRLGDVVKVMGFHNSSPELKFIRRSSLLLTINIDKNTEKDLQLAVEAATRLLAEQKLEIVDFTSHVDLSKEPGHYVIFFEMSGEGSEELLSECCNCLDKSFVDAGYVSSRKVKLIEALELRVVKSGTFQKILDHYLGLGAAVSQYKTPRCVGPTNTKVLQILTENVVHNYLSTAFN 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0280 577 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 577 - -
Lal18g0280 577 Coils Coil 12 32 - -
Lal18g0280 577 Pfam GH3 auxin-responsive promoter 18 552 IPR004993 -
Lal18g0280 577 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 577 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0280 Lal-Chr18 2294550 2299477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0280 19 574 EF-hand Containing Proteins AT1G23160 37.895 2.20e-135 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0280 K14506 - gmx:100794598 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0280 18 2294550 2299477 Lal18g0280 18 2294550 2299477 ECH
Lal6g0653 6 4262571 4265038 Lal18g0280 18 2294550 2299477 LSH
Lal22g0593 22 4167190 4171793 Lal18g0280 18 2294550 2299477 LSH
Lal18g0280 18 2294550 2299477 Lal6g0653 6 4262571 4265038 PCT
Lal18g0280 18 2294550 2299477 Lal22g0593 22 4167190 4171793 PCT
Lal18g0280 18 2294550 2299477 Lal18g0280 18 2294550 2299477 PCT
Lal6g0653 6 4262571 4265038 Lal18g0280 18 2294550 2299477 PCT
Lal22g0593 22 4167190 4171793 Lal18g0280 18 2294550 2299477 PCT