Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0593 ATGTTGGAGAAAGTGGAAGAGTTCAACATGGACAAAGTGGTAGAGGAATTTGAGGCAGTGACAAAGGATGCTGAGAGGGTTCAAAGGGAAACACTGAAAAGGATTTTGAAAGATAATGCATCAGCAGAATACTTGCTGGATTTAGGACTTAATGGAAGGACTGACCCTGAAAGTTTCAAGGCATGTGTCCCAGTGGTCACACACAAGGACTTGGAGCCTTATATCAATAGAATGATTGGTGGAGATTATTCTTCTATTCTCACTGGAAAACCCATCACAAACATGTCTTTAAGTTCTGGCACTACTCATGGCAAGCCAAAATATGTACCATGGAATGATGAATTGTTTGTAACCACTGTGCAGATATATCAGACCTCTTTTTCATTTAGGAACAGAGAGTTCCCCATAAAAAATGGCAAGGCCTTAAGCTTTATCTATAGCAGCAAGCAGTTCAAAACAGAAGGGGGTCTAGCTGCAGGCACTGCAACAACCAATTTGTTCCGTGACAAACGTTACAAGCAAGCAATGGCAGCACTTCAGTCACAATCTTGCAGCCCTGAGGAAGTAATATTTGGTTCTGATTTTCACCAATCATTGTACTGCCACCTCTTGTGTGGCCTAATTTTTAGGGACCAAGTCCAGCTTGTGTCTTCAACATTTGCACACAGCATTGTCCATGCTTTTAGGACCTTTGAACAAGTGTGGGAAGAGCTATGTCATGATATAAAGAAAGGTGTCCTTACCAGCAGGATCAAAGTTCCATCAATTAGAACTGCAATGTCTAAAATTCTCAAACCAGACCCAGAACTAGCCAATTTGATCTACAAAAAATGCACAGGGTTGAGCAACTGGTATGGGCTAATACAAGAGCTTTTTCCAAATGCCAAGTATGTGTATGGTATCATGACTGGGTCAATGGAGCCTTATTTGAAAAAGTTGAGGCATTATGCTGGTGAGGTGCCTTTGGTTACTTCTGATTATGGATCTTCTGAAGGGTGGGTAGGAACAAATGTTAGCCCAAAAGTGCCTCCTGAGTTGGCTACTTACACTGTGCTTCCTCAAATTGGTTACTTTGAATTCATCCCTCTGACAAAGAATAATTACATATGTGTGGATCCTAAGCCTGTGGGCCTAACTGAAGTGAAGGTTGGAGAGGAGTATGAGATTATTATGACCACTCCAGCAGGGTTATACAGGTATAGGCTAGGGGATGTAGTCAAGGTTACAGGGTTCCATAACTCAACTCCAAAACTCAAATTTATCCGTAGGAGTGGCCTTATGCTTACAGTTAACATAGACAAGAACACAGAGAAAGATCTACAATTAGCTGTGGAAGCCGCATCAAATGTACTAGCAGAAGAAAAATTTGAAGTTGTTGACTACACTAGCCATGTTGATTTATCCAAAGAGCCAGGACACTATGTTATATTCTGGGAAATAAGTGGTGAAGCAAGTGAAGAAGTGCTTGGTGAATGTTGCAATTGTTTAGATAAGTCTTTTATTGATGCTGGCTACACTAGTTCCCGCAAAGTCAATGGCATTGAGGCCCTTGAACTCCGAATTGTTAGGAGAGGAACATTCCAGAAGATTCTTGAACATTTCCTTGGATTAGGGGGTGCAGTTAGTCAATTTAAGACTCCAAGATGTGTGGACACTAATAACAGTAAAGTATTACAAATATTGAAAGAAAATGTTGTGAAGAATTATGTCAGCACTGCTTTTAATTGA 1728 0.4068 MLEKVEEFNMDKVVEEFEAVTKDAERVQRETLKRILKDNASAEYLLDLGLNGRTDPESFKACVPVVTHKDLEPYINRMIGGDYSSILTGKPITNMSLSSGTTHGKPKYVPWNDELFVTTVQIYQTSFSFRNREFPIKNGKALSFIYSSKQFKTEGGLAAGTATTNLFRDKRYKQAMAALQSQSCSPEEVIFGSDFHQSLYCHLLCGLIFRDQVQLVSSTFAHSIVHAFRTFEQVWEELCHDIKKGVLTSRIKVPSIRTAMSKILKPDPELANLIYKKCTGLSNWYGLIQELFPNAKYVYGIMTGSMEPYLKKLRHYAGEVPLVTSDYGSSEGWVGTNVSPKVPPELATYTVLPQIGYFEFIPLTKNNYICVDPKPVGLTEVKVGEEYEIIMTTPAGLYRYRLGDVVKVTGFHNSTPKLKFIRRSGLMLTVNIDKNTEKDLQLAVEAASNVLAEEKFEVVDYTSHVDLSKEPGHYVIFWEISGEASEEVLGECCNCLDKSFIDAGYTSSRKVNGIEALELRIVRRGTFQKILEHFLGLGGAVSQFKTPRCVDTNNSKVLQILKENVVKNYVSTAFN 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0593 575 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 575 - -
Lal22g0593 575 Coils Coil 10 30 - -
Lal22g0593 575 Pfam GH3 auxin-responsive promoter 16 552 IPR004993 -
Lal22g0593 575 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 575 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0593 Lal-Chr22 4167190 4171793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0593 17 572 EF-hand Containing Proteins AT1G23160 37.478 1.85e-132 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0593 K14506 - gmx:100813492 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0593 22 4167190 4171793 Lal22g0593 22 4167190 4171793 ECH
Lal6g0653 6 4262571 4265038 Lal22g0593 22 4167190 4171793 LSH
Lal22g0593 22 4167190 4171793 Lal18g0280 18 2294550 2299477 LSH
Lal18g0280 18 2294550 2299477 Lal22g0593 22 4167190 4171793 PCT
Lal22g0593 22 4167190 4171793 Lal18g0280 18 2294550 2299477 PCT