Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0587 ATGGACCTTCCCAGCCATAAATTCTTTCAATCTCAACCTGCTTTAACTACACATGGGGATTCAACCATTGAGAGCAACATGGGCTTGTATGGGAAAAACAAAAACAACCCTTTTGGAGATGATTTCCCTGATCCACTTTGCAAGCTCAATCTCAAAGAAACTTCAGAATTTGTCAAGTCATTTCCAATACCAAATGCTAATGCAGAAACCAACAACAACAACAACAATAATAATAACAACACTGTCACACAACAACATAGGAGACTAGAGGCACCTTCAACTCCTGGTAGACCTGTTTTCAACTTCACTTCTAATGTTGGACTTAGAAGAAACCTTTCAAGAAAGAACTTCCCTTCAAAATGGGATGATGCAGAGAAATGGGTCATGAACACTACCACCACCACTTCCTGCCAGGACTCACCATCTCTTATGAAACTGTCACTATCAGAATCCTCCTCAAAGAACAGCAGAAGCATTAGCAAACAATGTGATACCTTGAAGCAGCAAATGGAGAATGAAGAAATGGTGTCCAAACATGTCCCAAGCTTCCAAAGGTCTGCATCTTTGGACCACTACAACCCACTTGGTGCTTTCAATGGAGTGGTCTCATATGGAACAGACCACATGGTACTAAAAGATAAGTTCACAAATAGCATAGAGCCTATAATGCCAAATTATATATATTCAGGACCCACTAAAGAAGGGTTCTTGTTTAGAAACTCAGCTGGTGAGGCAATGCAAGATGAATGCACAGAAGTGATTCATGATGTTGAACATAAAGATGTTGGGACTGAAATGACTCCTCTTGGAAGTTCAACTACTTCAAGGTGTCACACACCGATGAAGAGTTCATCGCCGGCGCGCCACAACACTCCTGCTAGTAGGTCAGGACTATTGGCCTTGGCAAACCCCAATGCCAATAGCTGCACTGTTGATGTTATTAATCTGGAGTGCCATTTCTCTAAACTGAAACTAGGAAAACAATATGATTTAGTCACTTCAAATTGGAGCACAAGTGAAGAGGAGGAAGAGGAAATATCAAAGAGTTTGAGGCATAATTCTAGTCAGAAAGCTGATTCAGAATGTAGAGCTGCTACATGGGAAGAAGAGGAGAAGAACAAGTGCTGTCTGAGGTATCAAAGGGAAGAAGCAAAAATCCAAGCATGGGTAAACCTCCAAAATGCTAAAGCAGAATCTCAGTCAAGAAAGCTTGAGGTGAAAATACAAAAGATGAGATCAAAGGTGGAAGAGAAGTTGATGAAGAGAATGTCAGTGGTTCAAAGAAAAGCTGAGGAATGGAGATCAACAGCTAGACAACAACAAATGGAGCAAATCCAGAAGGCCACTGAACAAGCTCAAAAGATGTTACAAAACCATAACACACATTTTTCAAAGTACACCTCATGTGGTTGTTTCCCTTGCAATAACAATCATCACTAA 1440 0.4069 MDLPSHKFFQSQPALTTHGDSTIESNMGLYGKNKNNPFGDDFPDPLCKLNLKETSEFVKSFPIPNANAETNNNNNNNNNNTVTQQHRRLEAPSTPGRPVFNFTSNVGLRRNLSRKNFPSKWDDAEKWVMNTTTTTSCQDSPSLMKLSLSESSSKNSRSISKQCDTLKQQMENEEMVSKHVPSFQRSASLDHYNPLGAFNGVVSYGTDHMVLKDKFTNSIEPIMPNYIYSGPTKEGFLFRNSAGEAMQDECTEVIHDVEHKDVGTEMTPLGSSTTSRCHTPMKSSSPARHNTPASRSGLLALANPNANSCTVDVINLECHFSKLKLGKQYDLVTSNWSTSEEEEEEISKSLRHNSSQKADSECRAATWEEEEKNKCCLRYQREEAKIQAWVNLQNAKAESQSRKLEVKIQKMRSKVEEKLMKRMSVVQRKAEEWRSTARQQQMEQIQKATEQAQKMLQNHNTHFSKYTSCGCFPCNNNHH 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0587 479 MobiDBLite consensus disorder prediction 264 293 - -
Lal6g0587 479 PANTHER OS02G0116800 PROTEIN 1 475 - -
Lal6g0587 479 MobiDBLite consensus disorder prediction 9 28 - -
Lal6g0587 479 MobiDBLite consensus disorder prediction 63 100 - -
Lal6g0587 479 Coils Coil 394 414 - -
Lal6g0587 479 Coils Coil 438 462 - -
Lal6g0587 479 MobiDBLite consensus disorder prediction 1 28 - -
Lal6g0587 479 PANTHER OS11G0616300 PROTEIN 1 475 - -
Lal6g0587 479 MobiDBLite consensus disorder prediction 63 90 - -
Lal6g0587 479 Pfam Remorin, C-terminal region 361 460 IPR005516 -
Lal6g0587 479 MobiDBLite consensus disorder prediction 266 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0587 Lal-Chr6 3759429 3763096 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0587 - - gmx:100776089 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0587 6 3759429 3763096 Lal22g0529 22 3518088 3522127 LSH
Lal6g0587 6 3759429 3763096 Lal18g1077 18 13830785 13834091 LSH