Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1077 ATGAACATGCATGGGAATAACAAAAACAACCCCTTTGAAAATGATTTCACTGATCCACTTTGCAAGCTCAATCTCAACGAATCCTCAGAATTTGTCAAGTCATTTGCAATGCCAAATGGTAATGCAGAAACCAAAAACAACACTGCCACACAAAGACATAGGAGACTTCATGCTTCTTCAACTACTGTTAGACCTGTTTTCAGCTTCATTTCTAATGTTGGACTTGGAAGAAATCTTGCAAGGAAGAGATTCCCTTCAAAATGGGATGATGCAGAGAAATGGCTCATGAACACTACTTCTACCACCACCACCACCACCACCACCTCCTTCCATGACTCACCACCTTATGTGAAGTTGTCATTATCAGAGTCCTCAAAGAACAGAAAAAAAAGTAGCAGAAAATTTGACACCTTTAAGCAACAAATGGAGAATAGGGTCACAGTCAATGAAGAAAGGGTCACCAAACCTGTGCCAACTTTCCAAAGGTCTGCATCTTTTGAGCACTATAACCCATTTGGTGCTTTCAATGGAGTGGTCGCAGCATATTCAACAGACCACATAGCCCTAAAAGATAAGTTCACAGATAGCATAGAACCTATCATGCCAAATTTCAGATATTCAGAACCAACTCAAGAAGGGTTCTTGTTTAGAAACCTAGCTGAGGAAGCAGTGCAAGATGCATACACAGAAGTGATTCATGATGTTCATCATAGAGATGTTGGAAAAGAAATGACTCCACTTAGAAGTTCTACTACTTCAAGGTGCCACACACCAATCAAGAGTTCATCACCGACTCGTCATAACACTCCTGAAACTAGGTCTGGACTATTAGCCTTGCCAAACCCCAATGGCACTAAAGTGAAACTAGGAACAATAAATGATATAGTCTCTTCAAATTGGAGCACAAGTGAAGAAGAAGAAGAAGAAGAAGAGGAAAAGGAAATATCAAAGAGCTTGAGACATAATTCTAACCAAAAAAGTGATTCAGCATGTAGAGTTGCTAAATGGGAAGAAGATGAGAAGAACAAGTGCTATCTTAGATATGAGAGAGAGGAAGCAAAAATCCAAGCTTGGGTAAACCTACAAAATGCTAAAGCAGAAGCTCAATCAAGAAAGCTTGAGGTGAAAATACAAAAGATGAGATCAAAGATGGAAGAGAAGTTGATGAAAAATATGTCAGTGGTTCACAGGAAAACTGAGGAATGGAGAAGAATAGCTAGAAAACATCATTTGGAACAAATTCAGAAGAAAAGTGAACAAGCTCAAAAGATGATGCAGAAATATAATACACAATTTTCAAGGCACATTTCATGTGGTTGTTTCCCATGCCATAACAACCATCATTAG 1347 0.3883 MNMHGNNKNNPFENDFTDPLCKLNLNESSEFVKSFAMPNGNAETKNNTATQRHRRLHASSTTVRPVFSFISNVGLGRNLARKRFPSKWDDAEKWLMNTTSTTTTTTTTSFHDSPPYVKLSLSESSKNRKKSSRKFDTFKQQMENRVTVNEERVTKPVPTFQRSASFEHYNPFGAFNGVVAAYSTDHIALKDKFTDSIEPIMPNFRYSEPTQEGFLFRNLAEEAVQDAYTEVIHDVHHRDVGKEMTPLRSSTTSRCHTPIKSSSPTRHNTPETRSGLLALPNPNGTKVKLGTINDIVSSNWSTSEEEEEEEEEKEISKSLRHNSNQKSDSACRVAKWEEDEKNKCYLRYEREEAKIQAWVNLQNAKAEAQSRKLEVKIQKMRSKMEEKLMKNMSVVHRKTEEWRRIARKHHLEQIQKKSEQAQKMMQKYNTQFSRHISCGCFPCHNNHH 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1077 448 MobiDBLite consensus disorder prediction 298 328 - -
Lal18g1077 448 Coils Coil 411 431 - -
Lal18g1077 448 MobiDBLite consensus disorder prediction 242 283 - -
Lal18g1077 448 PANTHER OS02G0116800 PROTEIN 4 444 - -
Lal18g1077 448 Coils Coil 363 390 - -
Lal18g1077 448 Pfam Remorin, C-terminal region 332 427 IPR005516 -
Lal18g1077 448 MobiDBLite consensus disorder prediction 245 279 - -
Lal18g1077 448 PANTHER OS11G0616300 PROTEIN 4 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1077 Lal-Chr18 13830785 13834091 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1077 - - aip:107624762 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0587 6 3759429 3763096 Lal18g1077 18 13830785 13834091 LSH
Lal22g0529 22 3518088 3522127 Lal18g1077 18 13830785 13834091 LSH