Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0529 ATGGACCTTCCTACACTTCAATTCTTTCAACCTCAACCTCTTTTCACTTCACATGGGGAGTCACCTATTGAGAGCAACATGAACTTGTATGGTAAGAACAAAAACAACCCTTTTGAGGATGATTTCCCTGATCCACTTTGCAAGCTCAATCTCAAAGAAACCTCCGAATTTGTCAAGTCATTTCCAATACCAAATGGTAATGCAGAAACCAACAACAACAACAACAACAACAACAACACTGTCACACAACAACATAGGAGACTAGAGGCTCCTTCAACTCCTGGTAGACCTGTTTTCAGCTTCACCAATGTAGGACTTGGAAGAAACCTTTCAAGAAAGAACTTTCCTTCAAAATGGGATGATGCAGAGAAATGGCTCATGAGTACTACTACCTCCTCATTCTGCCATGACTCACCAGCTCATGTGAATCTGTCACTATCAGAGTCCTCAAAGAACAGCAGAAGCAGTAGCAGACAGTGTGACAACTTTAAGCAGCAAGTGGAGAACAAGGTCACAGTCAATGGAGAAAGGGTGTCCAAAACTGTCCCAACCTTCCAAAAGTCTGCATCTTTGGACCACTATAACCCATTTGCTGCTTTCAATGGAGTGGTCTCAGCATCTCCAACAGACCACATGGTACTAAAAGATAAGTTCACTGATAGCATAGAGCCTATATTGCCAAATTCCAGATATTTAGAACCAACTAAAGAAGTGTTCTTGTTTCGAAACCCGGCAAGAGATACAATGAAAGATGCATGCACAGAAGTGATTCATGATGTTCAGCATAAAGATGCTGGAACAGAAATGGATCCTCTTGGAATTTCCACTACTTCAAGGTGCCACACACCAATCAAAAGTTCATCGCCGGCTCGCCATAACACTCCTGCAAGTATGTCAGGACTATTGGCCTTGCCAAACCCCAATGGAACTAGCTGCACTATTGACCTGATTCAGCTAGAGGAGTGCCATTTCTCTAAACTCAAACTCGGGGCACAATATGATTTTGTCACTTCAAATTGGAGCACAAGTGAAGAGGATGAAGAGGAAATATCAAAGAGCTTAAGACATAATTCTAGCCGGAAAGCTGATTCGGAATGTAGAGCTGCTACATGGGAAGAAGAGGAGAAGAACAAGTATTGTCTTAGGTATCAGAGGGAAGAAGCAAGAATCCAAGCTTGGGTAAACCTCCAAAATGCTAAAGCAGAAGCCCATTCAAGAAAACTAGAGGTGAAGATACAAAAGATGAGATCAAACCTGGAAGAGAAGTTGATGAAGAGAATGTCAATAGTTCACAGAAAAGCTGAGGAATGGAGAAAAACTGCTAGACAACAACACTTGGAGCAAATCCAAAAGGCCACTGAACAAGCTCAAAAGATGATTCATAAGCATAACACACATTCTACAAGACACAGTTCATGTGGTTGCTTCCCTTTCAATAACAATTATCATTAA 1452 0.4153 MDLPTLQFFQPQPLFTSHGESPIESNMNLYGKNKNNPFEDDFPDPLCKLNLKETSEFVKSFPIPNGNAETNNNNNNNNNTVTQQHRRLEAPSTPGRPVFSFTNVGLGRNLSRKNFPSKWDDAEKWLMSTTTSSFCHDSPAHVNLSLSESSKNSRSSSRQCDNFKQQVENKVTVNGERVSKTVPTFQKSASLDHYNPFAAFNGVVSASPTDHMVLKDKFTDSIEPILPNSRYLEPTKEVFLFRNPARDTMKDACTEVIHDVQHKDAGTEMDPLGISTTSRCHTPIKSSSPARHNTPASMSGLLALPNPNGTSCTIDLIQLEECHFSKLKLGAQYDFVTSNWSTSEEDEEEISKSLRHNSSRKADSECRAATWEEEEKNKYCLRYQREEARIQAWVNLQNAKAEAHSRKLEVKIQKMRSNLEEKLMKRMSIVHRKAEEWRKTARQQHLEQIQKATEQAQKMIHKHNTHSTRHSSCGCFPFNNNYH 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0529 483 Coils Coil 442 462 - -
Lal22g0529 483 PANTHER OS11G0616300 PROTEIN 1 479 - -
Lal22g0529 483 Pfam Remorin, C-terminal region 365 466 IPR005516 -
Lal22g0529 483 PANTHER OS02G0116800 PROTEIN 1 479 - -
Lal22g0529 483 Coils Coil 398 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0529 Lal-Chr22 3518088 3522127 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0529 - - aip:107624762 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0587 6 3759429 3763096 Lal22g0529 22 3518088 3522127 LSH
Lal22g0529 22 3518088 3522127 Lal18g1077 18 13830785 13834091 LSH