Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0556 ATGGCGACTGCAACCATGGCTACTGCAGCCGGTGCAGCTGCTCTTTTGTACTACACATTGAATAGGAGGCTGCAGTCTCGCACGATTGATGATGAAGAACATATCAGTGATGCGCCCACGAATGTGCCTTTAGGTATTGACCGTGTTTCTCATAGATTAATCCAAGCCCCTGCTACTTGGTCGGAGACAATTTCAACATTGTCAGAGACTCTTAGGTTCACCTACTCAGAAACACTTGGGAAATGGCCCCTTGGAGATTTGGCATTTGGTATAAGCTTTCTTCTGAAGAGACAGGGAAACTATCATGTTGACAGTGTCTTTGCTGGTAAGGACAGTTCACAACTGAAAGGATCTGACATTATTGCTGAACTGAAGTATCTCTTGAACTTGTTGACACTTTGCTGGCATTTTTCGAAGAAGCCCTTTCCATTATTTCTGGAAGAAACTGGCTACAATGAAGAAAATGTTCTCTTTCAAGAACCAAAAGCAGGAATTTTGAAACCAGCTTTTACAATAATGGTTGATCACAACATGGGATGCTTTCTGTTATTGATTCGTGGTACACATAGCATCAAGGATACTTTAACAGCTGTCACAGGAACTGTGATACCTTTTCATCATAGTGTAGTTTATCAGGGGGGAGTTAGTGACTTGGTTTTAGGTTATGCACATTGTGGAATGGTTGCAGCCGCTCGATGGATTGCAAAGCTTGCAACTCCTTGTCTCCTTGAAGCACTTCGCCACCACCCTGACTATGAGGTCAAGATTGTAGGGCATTCCTTGGGTGGAGGCACAGCAGCACTCCTGACATATATATTAAGAGAGCAAAAAGAATTGTCTATGACTACATGTGTTACATTTGCTCCAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCAGGCAATGGTTTTATTACTTCTGTTATAAATGGAGCTGATTTGGTGCCTACATTCTCAGCTGCTTCTATAGATGATTTGCGTTCTGAGGTGACAGCATCAGCATGGATAAATGACTTGAGGAATCAAATTGAGCAAACAAGAATACTCAGTACTGTCTATCGTTCTGCTTCAGCATTGGGTTCTCGCCTCCCATCCATCGCCACAGCTAGAGCAAAAGTTGCTGGGGCTGGTGCAATTTTACAGCCAGTTTCTAATGGTACCCAGGTTGTGATGAAGAGGGCCAAGAGTATGGCCCAGGCAGCATGGGCACGTCCAAACCTTAACCTGTCCTCTTGGTCATGCATGGGACCCCGTCGCCGAGCTGTGGGTTCTCGTTCAAACACCAAAGGTGAAGGTGGTTCTCCTAGATGTTCATCATCCTCTGCCAATGAAGAGAGTTCTGATCCACTTATTTGTTCTCCTAAGAAGGGAGTTAATGCAAAGAACATGAACCTTCCCGTATCTTCATCTGTAGAAGAGTGGTCTTCTGAAATTGAATGTGCCAATGAAAGGACTTCAGATGCTGAGGGGAATGTTGTTGGTCACAATGACAGCGATCACATTACGGACCATGACAGGTATGAGGATCAGTTGAGTGAAGTGGAATTGTGGCAACGACTGGAACACGAACTGTTTGACAGACCTGGCGGTGAGGTTGAGGAGATAAGGGAAGAAGAAGAAGCAGCCATAGCAGAGGTAACTGATGGGCAAACCCAGAGCTCTGCGCCAGAAATGAAAGAAGTTCATAGATTTTTCCCTGCTGGAAAGATAATGCACATTGTTACATTCCACTCTGATGCTGATGAGCATGAAAATGATAGTAGTTCATCCTCAACAAGTTCGGACAGTAGCGAGCCAGATGAGGCTAAGATTGGGATTTTCCTTACTCCGAGATCTCTATACAGTAAAATTAGACTTTCACAGACCATGATCAGTGATCACTTCATGCCAAGTTATAGAAAGCAGATTGAAAGTCTAATTAAAGAACTGGAGGAAGAATCTGCTGAGGATCATAGAACACAAGTAATGTTATAG 1974 0.4397 MATATMATAAGAAALLYYTLNRRLQSRTIDDEEHISDAPTNVPLGIDRVSHRLIQAPATWSETISTLSETLRFTYSETLGKWPLGDLAFGISFLLKRQGNYHVDSVFAGKDSSQLKGSDIIAELKYLLNLLTLCWHFSKKPFPLFLEETGYNEENVLFQEPKAGILKPAFTIMVDHNMGCFLLLIRGTHSIKDTLTAVTGTVIPFHHSVVYQGGVSDLVLGYAHCGMVAAARWIAKLATPCLLEALRHHPDYEVKIVGHSLGGGTAALLTYILREQKELSMTTCVTFAPAACMTWELAESGNGFITSVINGADLVPTFSAASIDDLRSEVTASAWINDLRNQIEQTRILSTVYRSASALGSRLPSIATARAKVAGAGAILQPVSNGTQVVMKRAKSMAQAAWARPNLNLSSWSCMGPRRRAVGSRSNTKGEGGSPRCSSSSANEESSDPLICSPKKGVNAKNMNLPVSSSVEEWSSEIECANERTSDAEGNVVGHNDSDHITDHDRYEDQLSEVELWQRLEHELFDRPGGEVEEIREEEEAAIAEVTDGQTQSSAPEMKEVHRFFPAGKIMHIVTFHSDADEHENDSSSSSTSSDSSEPDEAKIGIFLTPRSLYSKIRLSQTMISDHFMPSYRKQIESLIKELEEESAEDHRTQVML 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0556 657 MobiDBLite consensus disorder prediction 418 455 - -
Lal6g0556 657 Gene3D alpha/beta hydrolase 148 356 IPR029058 -
Lal6g0556 657 SUPERFAMILY alpha/beta-Hydrolases 142 320 IPR029058 -
Lal6g0556 657 Pfam Lipase (class 3) 183 320 IPR002921 GO:0006629
Lal6g0556 657 MobiDBLite consensus disorder prediction 427 448 - -
Lal6g0556 657 Pfam Lipase 3 N-terminal region 48 127 IPR005592 GO:0016042
Lal6g0556 657 CDD Lipase_3 172 325 - -
Lal6g0556 657 MobiDBLite consensus disorder prediction 580 601 - -
Lal6g0556 657 Coils Coil 629 653 - -
Lal6g0556 657 Coils Coil 471 491 - -
Lal6g0556 657 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 1 647 - -
Lal6g0556 657 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0556 Lal-Chr6 3577927 3583918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0556 15 646 Acyl Lipid Metabolism Gene Families AT3G14075 62.675 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0556 - - gmx:100807086 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0556 6 3577927 3583918 Lal22g0505 22 3349912 3355920 LSH
Lal6g0556 6 3577927 3583918 Lal18g1104 18 14059280 14064994 LSH