Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1104 ATGGCAACTGCAACCATGGCTACTGCAGCAGGTGCAGCTGCTCTTTTGTACTACACATTGAATAGGAAGCTGCAGTCTCGCACAATTGGTGATGAAGATGAAGAACATACCAGTGATGCGCCTACGAATGTTCCTTTAGGTATTGACCGTGTTTCTCATAGATTAATACAAGCCCCTGCAACATGGTTGGAGACAATTTCAACATTGTCAGAGACTCTCAGGTTCACCTATTCAGAAACACTTGGGAAATGGCCCATTGGAGATTTGGCATTTGGTATAAACTTTCTTCTGAAGAGTCAGGGAAACTATCATGTTGACAGTGTCTTTGGTGGTAACGACAGTTTACAACTGAAAGGAGCTGACATTATTGTTGAACTTAAGTATCTTTTAAACTTGCTGACACTATGTTGGCATTTTTCGAAGAAACCCTTTCCATTGTTTCTGGAAGAAACTGGCTACAGTCAAGAAAGTGTTCTCCTTCAGGAACCAAAAGCAGGAATTTTGAAACCAGCTTTTACGATAATAGCTGATCACAACATGGGATGCTTTCTGTTATTGATTCGTGGCACACATAGTATCAAGGATACTCTGACAGCTGTCACAGGAACTGTGATACCTTTTCATCATAGCGTAGTTTATCAGGGGGGAGTTAGCAATCTGGTTTTAGGTTATGCACATTGTGGAATGGTTGCAGCCGCTCGATGGATTGCAAAGCTTGCTACTCCTTGTCTCCTTGAAGCACTTCACCACCACAGTGACTATGAAGTTAAGATTGTAGGGCACTCCTTGGGTGGAGGCACAGCAGCACTCCTGACGTATATATTAAGAGAGCAAAAGGAATTGTCTATGACTACATGTGTCACATTTGCTCCAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCAGGCAATAGTTTTATTACTTCTGTTATAAATGGAGCTGATTTGGTGCCTACATTCTCAGCTGCTTCTGTAGATGACTTGCGTTCTGAGGTGACTGCATCAGCATGGATAAATGACTTGAGGAATCAAATTGAGCAAACAAGAATTCTCAGTACTGTGTATCGTTCTGCTTCAGCATTGGGTTCTCGCCTCCCATCCATCGCTACTGCTAAAGCAAAAGTTGCTGGGGCTGGTGCAATTTTGCAGCCTGTTTCTAATGGTACCCAGGTTGCGATGAAGAGGGCCAAGAGTATGGCTCAGGCAGCATGGACACATCCAAACCTTACCCTGTCCTCTTGGTCATGTATCGGACCCCGTCGCCGAGCCGTGGGTTCTCACTCAAACACCAAAGGTGAAGATAATTCCCCTAGATCTTCATCCTCTGCCACTGAAGAGAGTTCTGATCCACTGATTTGTTATCCTAAGAAGGGAGTTAATGCAAAAAACATGAATCTTCCTGTATCTTCATCTGTAGAAGAGTGGTCTTCTGAAATCGAATTTGCCAATGAAAGGATTTTAGACGCTTCAGGGAACGTTGATCACGATGACGGCGAGCACATGACGGATCATGACAAGTATGAGGATCAGATGAGTGAAGTGGAATTGTGGCATCGACTGGAGCACGAACTGTATGACAGACCTGACGGTGAGGTTGAGGAGATAAGGGAAGAAGAAGCAGCCATAGCAGAGGTAACTGATGGGCAAACCGGGAGCTCTGCACCAGAAATGAAAGAAGTTCACAGATTTTTCCCTGCTGGAAAGATAATGCACATTGTTACATTCCACTCTGATGCTGAAGAGCATGAAAATTATAGTAGTTCATCGTCTACAAGTTCAGACAGCAGCGAGCCAGATGAGACTAAGATTGGGATATTCCTTACTCCGAGGTCTCTATACCGTAAAATTAGACTTTCACAAACCATGATTAGTGATCACTTCATGCCAGTTTATAGAAAGCAGATTGAAAGTCTAATTAAAGAACTGGAGGAAGAATCTGCTAAGGATCATAGAACACAAGTAGTGTTATAG 1971 0.4348 MATATMATAAGAAALLYYTLNRKLQSRTIGDEDEEHTSDAPTNVPLGIDRVSHRLIQAPATWLETISTLSETLRFTYSETLGKWPIGDLAFGINFLLKSQGNYHVDSVFGGNDSLQLKGADIIVELKYLLNLLTLCWHFSKKPFPLFLEETGYSQESVLLQEPKAGILKPAFTIIADHNMGCFLLLIRGTHSIKDTLTAVTGTVIPFHHSVVYQGGVSNLVLGYAHCGMVAAARWIAKLATPCLLEALHHHSDYEVKIVGHSLGGGTAALLTYILREQKELSMTTCVTFAPAACMTWELAESGNSFITSVINGADLVPTFSAASVDDLRSEVTASAWINDLRNQIEQTRILSTVYRSASALGSRLPSIATAKAKVAGAGAILQPVSNGTQVAMKRAKSMAQAAWTHPNLTLSSWSCIGPRRRAVGSHSNTKGEDNSPRSSSSATEESSDPLICYPKKGVNAKNMNLPVSSSVEEWSSEIEFANERILDASGNVDHDDGEHMTDHDKYEDQMSEVELWHRLEHELYDRPDGEVEEIREEEAAIAEVTDGQTGSSAPEMKEVHRFFPAGKIMHIVTFHSDAEEHENYSSSSSTSSDSSEPDETKIGIFLTPRSLYRKIRLSQTMISDHFMPVYRKQIESLIKELEEESAKDHRTQVVL 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1104 656 Coils Coil 628 648 - -
Lal18g1104 656 Pfam Lipase (class 3) 185 322 IPR002921 GO:0006629
Lal18g1104 656 CDD Lipase_3 177 321 - -
Lal18g1104 656 MobiDBLite consensus disorder prediction 429 448 - -
Lal18g1104 656 Pfam Lipase 3 N-terminal region 50 129 IPR005592 GO:0016042
Lal18g1104 656 MobiDBLite consensus disorder prediction 422 451 - -
Lal18g1104 656 MobiDBLite consensus disorder prediction 584 599 - -
Lal18g1104 656 MobiDBLite consensus disorder prediction 580 601 - -
Lal18g1104 656 Gene3D alpha/beta hydrolase 151 358 IPR029058 -
Lal18g1104 656 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 645 - -
Lal18g1104 656 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 1 645 - -
Lal18g1104 656 SUPERFAMILY alpha/beta-Hydrolases 143 322 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1104 Lal-Chr18 14059280 14064994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1104 15 645 Acyl Lipid Metabolism Gene Families AT3G14075 63.256 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1104 - - gmx:100807086 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0556 6 3577927 3583918 Lal18g1104 18 14059280 14064994 LSH
Lal22g0505 22 3349912 3355920 Lal18g1104 18 14059280 14064994 LSH