Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0505 ATGGTAACTGCAACAATGGCTACTGCAGCAAGTGCAGCTGCTATTTTGTACTACACATTGAATAGAAAGCTTCAATCTGGCAAGATTGATGATGAAGAACATACCACTGATGCACCAACGAATGTGCCTTTAGGTACTGACCGTGTTTCTCATAGATTAATCCAAGCCCCTGGTACATGGTTGGAGACAATTTCAACATTGTCAGAGACTCTCAGGTTCACCTATTCAGAAACACTTGGGAAATGGCCCATTGGTGATTTGGCATTTGGTATAAGCTTTCTTCTCAAGAGTCAGGGAAACTACAATGTTGACAGTGTCTTTGGCGGTAAGGACAGTTCACAACTGAAAGGATCTGACATTATTGCCGAACTTAAGCATCTCTTAAACTTATTGACATTGTGTTGGCATTTTTCGAAGAAGCCCTTTCCATCATTTCTGGAAGAAACTGGCTACACTGAAGAAAATGTTCTCCTTCAGGAACCAAAAGCAGGAATTTTGAAACCAGCTTTTACGATAATAGCTGATCACAGCATGGGGTGCTTTCTCTTAATGATTCGTGGCACACATAGTATCAAGGATACTCTAACAGCTGTCACAGGAACTGTGATACCTTTTCATCATAGTGTAGTTTACCAGGGAGGAGTTAGTGGTTTAGTTTTAGGTTATGCACATTGTGGAATGGTTGCAGCCGCTCGATGGATCGCAAAGCTTGCAATTCCTTGTCTCCTTGAAGCACTTCACCACCACCCTGACTATGAAGTTAAAATTGTAGGGCACTCCTTGGGTGGAGGTACAGCAGCACTCCTGACGTATATATTAAGAGAGCAAAAGGAGTTGTCTATGACTACATGTGTTACATTTGCTCCAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCAGGCAATAGTTTTATCACTTCTGTTATAAATGGAGCTGATTTGGTGCCTACATTCTCAGCTGCCTCTGTAGATGATTTGCGTTCTGAGGTGACAGCATCTGCATGGATAAATGACTTGAGGGATAAAATTGAGCAAACAAGAATACTCCGCATTGTCTATCGTTCTGCTTCTGCATTGGGTTCTCGCCTCCCATCCATCGCTACCGCTAGAGCGAAAGTTGCTGGGGCGGGTGCAATTTTGCAGCCAGTTTCTAATGGTACCCAGGTTGTGATGAAGAGGGCCAAGAGTATGGCTCAGGTAGCATGGACTCGTCCAAATCTTAACCTGTCCTCTTGGTCATGCATGGGACCCCGTCGCCGAGCCATTACTTCTCATTCAAATACCAAAGGTGAAGCTAGTTCCCCTAGATCTTCATCCTCTGCCAATGAAGAGAGTTCTGATCCACTTATTTGTTCTCCTAAGAAAGGAGTTAATGCAAAGAACATGAACCTTCCTGTATCTTCATATGTAGAAGAGTGGTCTTCTGAAATTGAATGTGCCAATGAAAGGAATTCCGATGCCAAGGGGAATGTCAATCTTGATGACGGCGAGCACATGACCAATCATGATAGGTATGAGGATCAGGTAACTGAAGTTGAATTATGGCAACAACTGGAGCAAGAACTGTATGACAGACCCGACGGTGAGGTTGAGGAGATAAGGGAAGAAGAAGCAGCAGCCATAGCAGAGGTAAATGGTGGGCAAACCCATAATTCTGCACCAGAAATGAAAGAAGTTCATAGATTTTTCCCTGCTGGAAAGATAATGCACATTGTTACATTCCACTCTGATGCTGATGAGCCTGAAAATGATAGTAGTTCATCCTCTACAAGTTCCGATAGTAGCGAGCCAGATGATACTAAGATTGGGATTTTCCTTACTCCAAGGTCACTATATAGTAAGATCAGACTTTCACAGAACATGATCAGTGATCACTTCATGCCAGTTTATAGTAAGCAGATTGAAAGTCTAATTAAGGAACTGAAGGAAGATTCTGCTGTCTCAAACCATGTCCTGAATATTGCCTCGTATCAATGA 1977 0.4299 MVTATMATAASAAAILYYTLNRKLQSGKIDDEEHTTDAPTNVPLGTDRVSHRLIQAPGTWLETISTLSETLRFTYSETLGKWPIGDLAFGISFLLKSQGNYNVDSVFGGKDSSQLKGSDIIAELKHLLNLLTLCWHFSKKPFPSFLEETGYTEENVLLQEPKAGILKPAFTIIADHSMGCFLLMIRGTHSIKDTLTAVTGTVIPFHHSVVYQGGVSGLVLGYAHCGMVAAARWIAKLAIPCLLEALHHHPDYEVKIVGHSLGGGTAALLTYILREQKELSMTTCVTFAPAACMTWELAESGNSFITSVINGADLVPTFSAASVDDLRSEVTASAWINDLRDKIEQTRILRIVYRSASALGSRLPSIATARAKVAGAGAILQPVSNGTQVVMKRAKSMAQVAWTRPNLNLSSWSCMGPRRRAITSHSNTKGEASSPRSSSSANEESSDPLICSPKKGVNAKNMNLPVSSYVEEWSSEIECANERNSDAKGNVNLDDGEHMTNHDRYEDQVTEVELWQQLEQELYDRPDGEVEEIREEEAAAIAEVNGGQTHNSAPEMKEVHRFFPAGKIMHIVTFHSDADEPENDSSSSSTSSDSSEPDDTKIGIFLTPRSLYSKIRLSQNMISDHFMPVYSKQIESLIKELKEDSAVSNHVLNIASYQ 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0505 658 Pfam Lipase 3 N-terminal region 48 127 IPR005592 GO:0016042
Lal22g0505 658 MobiDBLite consensus disorder prediction 583 598 - -
Lal22g0505 658 Pfam Lipase (class 3) 183 320 IPR002921 GO:0006629
Lal22g0505 658 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 645 - -
Lal22g0505 658 CDD Lipase_3 175 319 - -
Lal22g0505 658 Gene3D alpha/beta hydrolase 140 350 IPR029058 -
Lal22g0505 658 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 1 645 - -
Lal22g0505 658 Coils Coil 470 490 - -
Lal22g0505 658 MobiDBLite consensus disorder prediction 422 447 - -
Lal22g0505 658 SUPERFAMILY alpha/beta-Hydrolases 143 320 IPR029058 -
Lal22g0505 658 MobiDBLite consensus disorder prediction 422 457 - -
Lal22g0505 658 MobiDBLite consensus disorder prediction 577 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0505 Lal-Chr22 3349912 3355920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0505 15 641 Acyl Lipid Metabolism Gene Families AT3G14075 62.754 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0505 - - gmx:100807086 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0556 6 3577927 3583918 Lal22g0505 22 3349912 3355920 LSH
Lal22g0505 22 3349912 3355920 Lal18g1104 18 14059280 14064994 LSH