Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0497 ATGGAAAAGGAAGAGCTAGCAGAGACAAAGGACACAAGTCCTCAAGCTGTTGAAAAGTTAAAAGGAGATGCCTTTTCTGTTCAGTATGAAGACCAGGACAAAGAATCAAGGGATGTGGAAACTCAAAATATTGCTCATAATGGACCTGAGTTTGACCTTCAAAAAAATGATACATCATACCAGATAAGCTCTCAAGTTGATGAAAATCTGGATGGAGATGCCTTTACCGCTCAGAATGAAGATCGGGACGAAGAACCAGAGGATGTGAAAACTCAAAATGTGGGTCATGATGATGGACCCGAGTTTGACAACGAACGAGATGGTATACCAGACAAGGTAATTTATCAAGCAGAAGAAAATCTGGAGGGTGATACTTTTATTATTCAGAATGAAGATCGGGACAAAGAATCAAACGAGGCAAAAACACAAAATGTTGGCCATGATGGCCCTGAGTTTGTCAAAGAACAAGATGGTATACCAGATAAGGTAATTTCTCAAGCTGTCGAAGAGCTGGAGGGTATTATTCAGAATGAAGATCAGGACAGAGAATTGAAGGAGGTGAAAACACAAAATATTGGTCATGATGGCCTTGAGTTTGTCAGTGAACAAGATGATATATCAAACAAGGTTAATGAGATGACAGATGTAAAGTCGAATAGTGATGAGGAAATGAAAGGCAACGAGGCTGGAGAATCTGAGTTGGCTCAGAGGATAGATAAGAGTAGGGATTTGCAGTGTGGAAATCCAGAAGATAACTTCGTGACCAGTAATGTTCCATGTGCATTGATTCAAATGGATGAGTGTAATTCCACCAAATCTGAAATTCAAGTCAATGATGTTGGACAAGAGCGCTTTGGTGTTAAGGTTGATGATGACAAAGATTTTGAGTCTAAAAGTCTAGATAATAATTCTGGACAGAATGACTTGGATAAGGAGAAGGATGAGACTAAAGGCATGAAGTCAATACAAATGAATCAAAAGACAGATGACACTCCAAATGAGGACAATAATATGGAGCCGGTATTTGATGGAAGAGAGGTTCCTGAGATTGAAGTTAGCCAGAGCAAATCCACCCATAATTTGGATGCAAATCAGGAAAATCCACGTGTGGTCGAGAAGGCAGTAGCACTTAAAAACTTTGTTAGGGAGAAAAGTATAGTAGCAGTCTCCATTTTGCTGCGTGGCCTTTCTCTAAAACGTGATGATTGCACTACGAATAATTCTGAGGATCAAAATAAGGATGGCTCGAATTTATCAAAAATCTGTGAATCTAAAGAGGTTTCTGAGAAGACTGATCAAAGGGAGGATTCGATAACCGAAGGTCCACCACAGCCCATAGCAATGAAAGGAAGGATTATAGTGTACACAAGACTAGGGTGCCAAGAATGTAAAGAGGTTAGACAATTTTTGTATGTAAAAAGACTTAGATATGTTGAAATCAACATTGATGTGTACCCTAGTAGAAAGATGGAGCTGGAGAAGAACTCTGGATCTACTTCTGTTCCCAAGGTTTTTTTCAATGAAATACTTATTGGAAGCTTGAGTGAGCTAAAGACCTTAAATGAGTCTGGCAAGTTTGATGAGAAGATTGACTTTCTTATCACTGAAGCGCCATCATTTGAAGCACCATTACCGCCACTTTCTGGAGAGGATGATGTGTCTACTAGTGGGGCACTTGATGAAATGGCTCTGATTGTCCGCAAAATGAAAGAATCTATTGTTGTGAAGGACAGATTTAGCAAAATGCGAAGGTTCACTAATTGCTTTCTCGGCTTCGAAGCTGTGGATTTCTTGTCAGCAGATCAATATTTGGAAAGGAAAGAGGCTGTTGAATTTGCTCGAAAGCTTGCAAGCAAGCTCTTCTTTCAACACGTTCTTGATGAGATCCTGTTTGAGGATGGTAATCACTTGTATCGGTTTTTGGATGATGATCCAATTGTGGCATCTCAATGTCACAACATTCCAAGGGGGATAATTACTGTAAAGCCCAAGTCTATGACAGAAATAGCATCAAGGCTGAGGTTGATGTCCTATGCAATGTTTGAAGCCTATGCCTCTGAAGACGGACGTCATGTTGACTACAGAAGCATTCATGGAAGTGAGGAGTTTGCAAGGTATCTGAGAATAGTAGAAACTCTCCAAAGAGTGGAAGTATGGGATTTGTCTAGAGAGGAGAAGCTTGCTTTCTTTATTAATCTATACAATATGATGACCATCCATGCAATCTTAGTATGGGGTCATCCAGCTGGAGCACTAGAAAGAAGGAAACTGTTTGGAGAGTTTAAATATGTTATTGGTGCATCCACTTACTCACTTTCAGCTATTCAGAATGGCATTTTAAGGGGAAACCAGCGACCACCATATAACCTTATGAAGTTATTTGGTGCAAAAGATAAACGCTCAAAGGTGGCCCTCCCTTACCCTGAACCTCTTATTCATTTTGTTTTAGTATGTGGTACTCGATCTGGACCTGCACTTCGGTGCTATTCTCCTGGGGATATTGACAAAGAATTAATGGATGCTGCTCGCAATTTCTTGAGAAGTGGTGGCGTTTTAATTGATTCGACTGCAAAGGTTGCATATGCTAGTAAGATTCTCAAATGGTTTAGTGTAGATTTTGGCAAGAATGAGGCAGAGATACTGAAGCATGTGTCCAACTACTTAGATCCAGCTGACTCACAAGTATTGTTGGATCTTCTTGCTTCTTCTGAGTTGAAGGTCATATATCAGCCTTATGATTGGGGTTTGAACTGCTAG 2757 0.4008 MEKEELAETKDTSPQAVEKLKGDAFSVQYEDQDKESRDVETQNIAHNGPEFDLQKNDTSYQISSQVDENLDGDAFTAQNEDRDEEPEDVKTQNVGHDDGPEFDNERDGIPDKVIYQAEENLEGDTFIIQNEDRDKESNEAKTQNVGHDGPEFVKEQDGIPDKVISQAVEELEGIIQNEDQDRELKEVKTQNIGHDGLEFVSEQDDISNKVNEMTDVKSNSDEEMKGNEAGESELAQRIDKSRDLQCGNPEDNFVTSNVPCALIQMDECNSTKSEIQVNDVGQERFGVKVDDDKDFESKSLDNNSGQNDLDKEKDETKGMKSIQMNQKTDDTPNEDNNMEPVFDGREVPEIEVSQSKSTHNLDANQENPRVVEKAVALKNFVREKSIVAVSILLRGLSLKRDDCTTNNSEDQNKDGSNLSKICESKEVSEKTDQREDSITEGPPQPIAMKGRIIVYTRLGCQECKEVRQFLYVKRLRYVEINIDVYPSRKMELEKNSGSTSVPKVFFNEILIGSLSELKTLNESGKFDEKIDFLITEAPSFEAPLPPLSGEDDVSTSGALDEMALIVRKMKESIVVKDRFSKMRRFTNCFLGFEAVDFLSADQYLERKEAVEFARKLASKLFFQHVLDEILFEDGNHLYRFLDDDPIVASQCHNIPRGIITVKPKSMTEIASRLRLMSYAMFEAYASEDGRHVDYRSIHGSEEFARYLRIVETLQRVEVWDLSREEKLAFFINLYNMMTIHAILVWGHPAGALERRKLFGEFKYVIGASTYSLSAIQNGILRGNQRPPYNLMKLFGAKDKRSKVALPYPEPLIHFVLVCGTRSGPALRCYSPGDIDKELMDAARNFLRSGGVLIDSTAKVAYASKILKWFSVDFGKNEAEILKHVSNYLDPADSQVLLDLLASSELKVIYQPYDWGLNC 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0497 918 MobiDBLite consensus disorder prediction 47 72 - -
Lal6g0497 918 MobiDBLite consensus disorder prediction 293 341 - -
Lal6g0497 918 MobiDBLite consensus disorder prediction 215 249 - -
Lal6g0497 918 MobiDBLite consensus disorder prediction 75 108 - -
Lal6g0497 918 MobiDBLite consensus disorder prediction 215 246 - -
Lal6g0497 918 MobiDBLite consensus disorder prediction 419 437 - -
Lal6g0497 918 CDD DEP 565 639 - -
Lal6g0497 918 ProSiteProfiles Glutaredoxin domain profile. 440 537 - -
Lal6g0497 918 SMART DEP_3 569 642 IPR000591 GO:0035556
Lal6g0497 918 MobiDBLite consensus disorder prediction 24 41 - -
Lal6g0497 918 MobiDBLite consensus disorder prediction 1 17 - -
Lal6g0497 918 ProSiteProfiles DEP domain profile. 569 642 IPR000591 GO:0035556
Lal6g0497 918 MobiDBLite consensus disorder prediction 129 158 - -
Lal6g0497 918 Gene3D - 554 647 IPR036388 -
Lal6g0497 918 MobiDBLite consensus disorder prediction 401 444 - -
Lal6g0497 918 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 573 640 IPR000591 GO:0035556
Lal6g0497 918 MobiDBLite consensus disorder prediction 293 320 - -
Lal6g0497 918 Gene3D Glutaredoxin 447 532 - -
Lal6g0497 918 Pfam Protein of unknown function, DUF547 720 846 IPR006869 -
Lal6g0497 918 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 1 917 - -
Lal6g0497 918 SUPERFAMILY Thioredoxin-like 448 530 IPR036249 -
Lal6g0497 918 MobiDBLite consensus disorder prediction 1 108 - -
Lal6g0497 918 Pfam Glutaredoxin 452 508 IPR002109 -
Lal6g0497 918 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 1 917 - -
Lal6g0497 918 SUPERFAMILY "Winged helix" DNA-binding domain 560 650 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0497 Lal-Chr6 3182343 3188389 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0497 - - ccaj:109814814 1120.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0497 6 3182343 3188389 Lal6g0497 6 3182343 3188389 ECH
Lal6g0497 6 3182343 3188389 Lal17g0437 17 2978578 2983903 PCT
Lal6g0497 6 3182343 3188389 Lal4g0383 4 2626786 2635582 PCT
Lal17g0437 17 2978578 2983903 Lal6g0497 6 3182343 3188389 PCT
Lal4g0383 4 2626786 2635582 Lal6g0497 6 3182343 3188389 PCT