Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0437 ATGGAAAATAGAGAGTTAGTGGAGACAAAGGAAGCAATATCTCAGGCTGTTGAGAATATGGAACTAGATGCTCTAGATATCCAAGGTAAATATCAGGACAAGCAATCGAAGGAGTCAAAAACTTTGGATATTGGTCATAATGGCCACGGATTTGACACTGAACAAGATGATAAGTCAAACAAGATAAATATTGTTGCAGTAATTGAAACTGAAGGCAATACTGTTGCACAAGAGTATTCCCGTGATAAGGTGGATGTCAGTGGAGATTTTGAGCCTAAAAGTCAAGAGGTAGACACAAATAATGTTGTGCAGAATGACTTGGCTAAAGAGAATAATGACAGTAGAGACAAGGAACCAAAGCACATGGATCAAAATGCAGATGAAATTCCAAGTGAAGACCCCAATTTGGAGCCTGTATTTGATGGAACAGAGGTTCCCGGGATGGAAGCTTGCCGGAGCTCATCTACCCGTAAGTTGGACTCCGACCAGGAGACTCTAGTTGTGGTTGAGAAGGCAGTGGCTCTTAAAAATTTTGTCAAGGAGAAAAGTGCAGTAGCAGTCTCCACAATGCTGCGCCGCCTTTCTGGGAAAAGCGATGAAGGTGCTGCAGGAAATTTTGATGATGAAGGTAAAGATGTTTCAGGCTTCTCAAATAACAGTGAGCCCAATGCTGTTTCTGAGAAGTCAGTAGAGAAATTTGACTGGAATCCCTTAAATTATCTTAAGAAGTCATCTGATGCTGGTGTGGAAAACAAAACTGAGCGGAGGAATTCCCTAACCAGAGGTCCACCAACACCAATAGCCATGAAAGGACGGATAATACTATACACAAGATTGGGGTGTGAAGAATCTAAACAGATTAGGCATTTTTTACATATGAAAGGGCTTAGGTATGTTGAAATCAACGTAGATGTGTACCCGAGTAGAAAGATGGAACTGGAGAAGATTTCTGGGTCTACATCTGTTCCCAAGGTTTATTTCAATGAAATACTTATTGGAGGACTGAGTGAGGTAAAGACCTTAAATGAGTCTGGCAAGCTTGATGAGAAGATAGACTTTCTTATTACTGAAACACCAATATTTGAAGCCCCATCACCTCCTCTACCTGGAGAGGATGATGAGTCTAGTAGTGGGGCACTTGATGAATTGGCTCTAGTTGTCCGCAAAATGAAAGAATCTATTGCTGTAAAGGACCGATTTTACAAAATGCGCAGGTTCTCTAACTGTTTTCTTGCCTCAGAAGCTGTGGACTTCTTATCAGAAGATCAATATTTGGAAAGGCAAGAGGCTGTTGAGTTTGCACAAAAGCTTGGTAGCAAATTCTTCTTTCATCATGCTCTTGATGAGAACATATTTGAGGATGGCAATCATTTATATCGGTTTTTGGATGATGATCCAATTGTGGCATCACAATGTCATAACATTCCAAGGGGAATACTTACTGTGAAGCCTAAGCCTATAGCAGAAATTGCGTCAAGGCTGAGATTTCTGTCGTATGCAATGTTTGAAGCCTATGTTTCTGAAGATGGGCGTCATGTTGATTATATGAGCATGCATGGAAGTGAGGAATTCGCAAGGTATCTGAGAATAGTGGAGGAGCTCCAAAGAGTCGAAATATTGGACTTGTCTAGAGAAGAGAAGCTTGCTTTCTTTATTAATCTTTATAATATGATGGCTATCCATGCAATATTGGTATTGGGGCATCCAGCTGGAGCACTGGAAAGAAGAAAATTATTTGGGGAGTTCAGATATGTTATTGGTGGGTCAACCTACTCACTTTCAGCTATTCATAATGGCATATTGAGGGGAAACCAGCGACCGCCTTATAACCTTAAGAAGCCATTTGGTGCAAAAGATAAGCGCACAAGGGTGGCACTCCCTTACCCTGAGCCTCTTATTCATTTTGCTTTGGTATGTGGTACTCGATCTGGGCCTGCACTTCGGTGCTATTCTCCTAAAAATATTGATGAAGAGTTAATGGATGCAGCCCGTAATTTCTTGAGGAGTGGAGGTGTTGTAATTGATTTGACTGCAAAGACTGCACATGCTAGTATGATCCTTAAATGGTATAGTATAGATTTTGGCAAGAACGAGGTAGAGGTACTCAAGCATGTATCAAACTACTTAGATCCAGCCGACTCGGAAAAATTACTGGACCTGCTTGCTACTTCGGATTTGAAGGTGACATATCAGACTTATGATTGGGGTTTGAACAGCTAG 2220 0.4117 MENRELVETKEAISQAVENMELDALDIQGKYQDKQSKESKTLDIGHNGHGFDTEQDDKSNKINIVAVIETEGNTVAQEYSRDKVDVSGDFEPKSQEVDTNNVVQNDLAKENNDSRDKEPKHMDQNADEIPSEDPNLEPVFDGTEVPGMEACRSSSTRKLDSDQETLVVVEKAVALKNFVKEKSAVAVSTMLRRLSGKSDEGAAGNFDDEGKDVSGFSNNSEPNAVSEKSVEKFDWNPLNYLKKSSDAGVENKTERRNSLTRGPPTPIAMKGRIILYTRLGCEESKQIRHFLHMKGLRYVEINVDVYPSRKMELEKISGSTSVPKVYFNEILIGGLSEVKTLNESGKLDEKIDFLITETPIFEAPSPPLPGEDDESSSGALDELALVVRKMKESIAVKDRFYKMRRFSNCFLASEAVDFLSEDQYLERQEAVEFAQKLGSKFFFHHALDENIFEDGNHLYRFLDDDPIVASQCHNIPRGILTVKPKPIAEIASRLRFLSYAMFEAYVSEDGRHVDYMSMHGSEEFARYLRIVEELQRVEILDLSREEKLAFFINLYNMMAIHAILVLGHPAGALERRKLFGEFRYVIGGSTYSLSAIHNGILRGNQRPPYNLKKPFGAKDKRTRVALPYPEPLIHFALVCGTRSGPALRCYSPKNIDEELMDAARNFLRSGGVVIDLTAKTAHASMILKWYSIDFGKNEVEVLKHVSNYLDPADSEKLLDLLATSDLKVTYQTYDWGLNS 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0437 739 MobiDBLite consensus disorder prediction 109 128 - -
Lal17g0437 739 Pfam Protein of unknown function, DUF547 541 667 IPR006869 -
Lal17g0437 739 SUPERFAMILY "Winged helix" DNA-binding domain 381 470 IPR036390 -
Lal17g0437 739 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 1 738 - -
Lal17g0437 739 Pfam Glutaredoxin 273 329 IPR002109 -
Lal17g0437 739 MobiDBLite consensus disorder prediction 197 230 - -
Lal17g0437 739 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 394 461 IPR000591 GO:0035556
Lal17g0437 739 Gene3D Glutaredoxin 268 353 - -
Lal17g0437 739 MobiDBLite consensus disorder prediction 93 108 - -
Lal17g0437 739 MobiDBLite consensus disorder prediction 86 138 - -
Lal17g0437 739 CDD DEP 382 460 - -
Lal17g0437 739 SMART DEP_3 390 463 IPR000591 GO:0035556
Lal17g0437 739 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 1 738 - -
Lal17g0437 739 MobiDBLite consensus disorder prediction 29 59 - -
Lal17g0437 739 MobiDBLite consensus disorder prediction 212 226 - -
Lal17g0437 739 Coils Coil 3 23 - -
Lal17g0437 739 MobiDBLite consensus disorder prediction 29 60 - -
Lal17g0437 739 SUPERFAMILY Thioredoxin-like 270 352 IPR036249 -
Lal17g0437 739 Gene3D - 381 506 IPR036388 -
Lal17g0437 739 ProSiteProfiles Glutaredoxin domain profile. 261 358 - -
Lal17g0437 739 ProSiteProfiles DEP domain profile. 390 463 IPR000591 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0437 Lal-Chr17 2978578 2983903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0437 - - ccaj:109797380 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0437 17 2978578 2983903 Lal17g0437 17 2978578 2983903 ECH
Lal17g0437 17 2978578 2983903 Lal4g0383 4 2626786 2635582 LSH
Lal6g0497 6 3182343 3188389 Lal17g0437 17 2978578 2983903 PCT
Lal17g0437 17 2978578 2983903 Lal6g0497 6 3182343 3188389 PCT