Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0383 ATGCTGATGGCAAGCTGGAAGCAATTTCTCATGCTGAAGGCGATACTGTTACACAAGAGTATTCCGGTGTTAAGGTGGATGCTAGTGGAGATTTTGAGCCTAAAGAGAAAGAAGCCGTTAGAGACAAGGAACCAAAGCACATGGATCAAAATGCAAATGAAATTGGACTCTGACCAGGAGACTCCACTTGTGGTTGAGAAGGCAGTGGCTCTTAAAAATCTTGTTAAGGAGAAAAGTTTAGTAGCAGTCTCTACTGTGCTGCGTCGCCTTTCTGGAAAAAGTGATGAAGGTGCTGTGAGTAATTTTGATGATGAAGGTAATGTTTCAGGTTTCTCAAAAGACAGTGAACCCAATGCTGCTGCTTCTGAGAAGTCAGGGGAGAAATTTGACTGGAATCCCTTAAATTATATTAAGAAGTTATCTGATGTTGATTTGGAAAACAAAACTGAGTGGAGGGATTCCCTAACTAGAGCTCCACCAACACCAATAGCCATGAAAGGAAGGATTATACTATACACAAAATTGGGGTGCCAAGAATCTAAAAATATTAGGCAATTTTTGTATATGAAAAGGCTTAGGTATGTTGAAATCAATATAGATGTGTACCCCGGTAGAAAGATGGAGCTGGGGAATATTTCTGGATCTACTTCTGTTCCCAAGGTTTATTTCAATGAAATACTTATTGGAGGGTTGAGTGAGCTAAAGACATTGGATGAGTCTGGCAAGCTTGACGAGAAGATTGACTTTGTAATTACGGAAACACCAATATTTGAAGCCCCATCACCTCCTTTTCCGGGAGAGGATGAAGAGTCCAGTAGTGGGGAACTTGATGAAATGGCTCTTGTTGTCCTCAAATTGAAAGCATCTATTGCTGTGAAGGACCGATTTTACAAAATGCGCATGTTCACTAACTGTTTTCTTGCCTCAGAAGCTGTGGACTTCTTATCAGAAGATCAATATTTGGAAAGGCCAGAGGCTGTTGAGTTTGCACAGATGCTTGCTAGCAAATTCTTCTTTAATCATGTTCTTGATGAGAATCTATTTGAGGATGGCAATCATATATATCGGTTTTTGGATGATGATCCAATTGTGGTGTCACAATGTCACAACATTCTGCGGGGCATAATTACTGTGAAGCCCAAGCGTATAACAGAAATTGCATCAAGGCTGAGATTTCTGACCTCTGCATTGTTTGAAGCCTATGTTTCTGAAGATGGACGTCATGTTGATTATACTAGTTTGCATCGAAGTGAGGAGTTTGCAAGGTATCTGAGAATAGTTGAGGAGCTCCAAAGAGTGGAAATATGGGATTTGTCTAGAGAAGAGAGCCTTGCTTTCTTTATTAATCTTTATAATATGATGGCCATCCAGCTGGAGCACTTGAAAGAAGGAAATTATTTGGAGAGTTTAGATATGGTGAGCCTCAGTGCAACGGTGAGATTGCTTGCTTGTGACCTAGAGGTCATGAGTTCAAATCCTAGAAACACTATCTTCGCTTATGAGGATAAGGTAGCACTCCCTTACCCTGAGCCTCTTATTCATTTTGCTTTGGTAAGTGGTACCCGATCTGGGCCTGCACTTCGGTGCTATTCTCCTAAAACAATTGATGAAGAATTAATTCATGCAGCCCGTAATTTCTTGAGGAGTGGAGGTGTTGTAATTGATTTGACCGCAAAAACTGCACAGGCTAGTAAGATCCTTAAATGGTATAGTGCAGATTTTGGCAAGAGTGAGGTAGAGATACTCAAGCATGTATCAAACTACTTAGATCCAGCTTACTCAGAAAAATTACTAATCCTGCTTGCTACTTCAGACTTGAAGGTGACTTATCAACCTTATGACTGGGGTTTGAACAACTAG 1860 0.4059 MLMASWKQFLMLKAILLHKSIPVLRWMLVEILSLKRKKPLETRNQSTWIKMQMKLDSDQETPLVVEKAVALKNLVKEKSLVAVSTVLRRLSGKSDEGAVSNFDDEGNVSGFSKDSEPNAAASEKSGEKFDWNPLNYIKKLSDVDLENKTEWRDSLTRAPPTPIAMKGRIILYTKLGCQESKNIRQFLYMKRLRYVEINIDVYPGRKMELGNISGSTSVPKVYFNEILIGGLSELKTLDESGKLDEKIDFVITETPIFEAPSPPFPGEDEESSSGELDEMALVVLKLKASIAVKDRFYKMRMFTNCFLASEAVDFLSEDQYLERPEAVEFAQMLASKFFFNHVLDENLFEDGNHIYRFLDDDPIVVSQCHNILRGIITVKPKRITEIASRLRFLTSALFEAYVSEDGRHVDYTSLHRSEEFARYLRIVEELQRVEIWDLSREESLAFFINLYNMMAIQLEHLKEGNYLESLDMVSLSATVRLLACDLEVMSSNPRNTIFAYEDKVALPYPEPLIHFALVSGTRSGPALRCYSPKTIDEELIHAARNFLRSGGVVIDLTAKTAQASKILKWYSADFGKSEVEILKHVSNYLDPAYSEKLLILLATSDLKVTYQPYDWGLNN 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0383 619 MobiDBLite consensus disorder prediction 105 119 - -
Lal4g0383 619 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 503 618 - -
Lal4g0383 619 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 41 456 - -
Lal4g0383 619 Pfam Glutaredoxin 169 225 IPR002109 -
Lal4g0383 619 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 290 357 IPR000591 GO:0035556
Lal4g0383 619 ProSiteProfiles Glutaredoxin domain profile. 157 254 - -
Lal4g0383 619 SUPERFAMILY "Winged helix" DNA-binding domain 278 363 IPR036390 -
Lal4g0383 619 CDD DEP 283 356 - -
Lal4g0383 619 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 503 618 - -
Lal4g0383 619 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 41 456 - -
Lal4g0383 619 Gene3D - 273 363 IPR036388 -
Lal4g0383 619 MobiDBLite consensus disorder prediction 101 126 - -
Lal4g0383 619 Pfam Protein of unknown function, DUF547 437 547 IPR006869 -
Lal4g0383 619 Gene3D Glutaredoxin 164 249 - -
Lal4g0383 619 SUPERFAMILY Thioredoxin-like 166 248 IPR036249 -
Lal4g0383 619 SMART DEP_3 286 359 IPR000591 GO:0035556
Lal4g0383 619 ProSiteProfiles DEP domain profile. 286 359 IPR000591 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0383 Lal-Chr4 2626786 2635582 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0383 - - gmx:100820242 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0383 4 2626786 2635582 Lal4g0383 4 2626786 2635582 ECH
Lal17g0437 17 2978578 2983903 Lal4g0383 4 2626786 2635582 LSH
Lal6g0497 6 3182343 3188389 Lal4g0383 4 2626786 2635582 PCT
Lal4g0383 4 2626786 2635582 Lal6g0497 6 3182343 3188389 PCT