Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0480 ATGGATTCTGGTAATAGTAGAAGTATCTCTTCTAGTGGTGATGAAGAATATGATTCACGAGTTGATCACACAACACTGCTCCCTTCAACCTTCCTCAATCATCCTCCAACCCATTTTGGTCAATCTTCATCCCTTAATGTTTCTTCTCATCATCATAATCCATCTTTCTTTGATCTTTCATCTAGCTACCTTCACTCTATACCAAACACAAATCCCAACTCTTTCCTTAATTTGGACGCCACCACTACTTCTACAGCTCAAGGCAAAAGACCTGAACCCAATTGCACTGACCCTCCAAACCTACAAGGATTTAACCAAGGGTTGTGTCCACCACCTCATGGTCTTAGCCATGATGAGAACAAAAATGCGAGGGTGGTTTCATCATCAGCACTTACTAATAATGCATCAGCAACACGAAACTCAAAGAAGAGAACTAGAGCTTCAAGAAGAGCACCTACAACTGTTCTTACCACCGACACCTCAAATTTCAGAGCCATGGTTCAAGAATTCACTGGCATCCCTGCACCACCCTTTTCAGGCTCATCATCTTACTCCATCACTCGCCGGCTTGACCTTCTTACCGGTTCCTCCTCTTCCTTAAGGACCAGTGCCTCTCATCACTTGGATACAACACCCTCTTTTTACCCTTTGCGTCCTTCGCCACAAAAACCTCATCATCAACAAAACCCTTTTCCTTCAACGTTGTTGCACAATAATAACATGGTTGATGCTATAGCTTCTTCCACTACCAACAATAATAACTCCATTAACTACCAACTACCACCTGATCTGGGTCTACCCTATCATCACCACTCACAGAACATCATACTCAGCATGCAACAAAACTACCCTAATGTTATACCGTTTCACCAAACACCTCTGCATTCTTTAGGAAACCATGTCCTTTCAGGGTTTGGTGCAAAGTCACCAGCAAGTTTATCCGTACAATCACTTGAGGAACTTGGTATGAATCATGGGCAAGTGAATAGTGTTGAGTTTGTTGGTGCTAGTAGTGTATCAATATCCCAAGGTCATGGCCGTGTAACTTCTGATCATGGAAATGGAAGAGAGCTGAACTTCTCAAAAGGTTCTGAATCAAGCAGTTTGAACCATGAAATTAAAGAATTTGGGGAATAA 1137 0.423 MDSGNSRSISSSGDEEYDSRVDHTTLLPSTFLNHPPTHFGQSSSLNVSSHHHNPSFFDLSSSYLHSIPNTNPNSFLNLDATTTSTAQGKRPEPNCTDPPNLQGFNQGLCPPPHGLSHDENKNARVVSSSALTNNASATRNSKKRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPFSGSSSYSITRRLDLLTGSSSSLRTSASHHLDTTPSFYPLRPSPQKPHHQQNPFPSTLLHNNNMVDAIASSTTNNNNSINYQLPPDLGLPYHHHSQNIILSMQQNYPNVIPFHQTPLHSLGNHVLSGFGAKSPASLSVQSLEELGMNHGQVNSVEFVGASSVSISQGHGRVTSDHGNGRELNFSKGSESSSLNHEIKEFGE 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0480 378 Pfam VQ motif 150 177 IPR008889 -
Lal6g0480 378 MobiDBLite consensus disorder prediction 200 229 - -
Lal6g0480 378 MobiDBLite consensus disorder prediction 121 141 - -
Lal6g0480 378 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 340 IPR039609 -
Lal6g0480 378 MobiDBLite consensus disorder prediction 1 20 - -
Lal6g0480 378 Coils Coil 378 378 - -
Lal6g0480 378 MobiDBLite consensus disorder prediction 83 157 - -
Lal6g0480 378 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 340 - -
Lal6g0480 378 MobiDBLite consensus disorder prediction 343 378 - -
Lal6g0480 378 MobiDBLite consensus disorder prediction 343 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0480 Lal-Chr6 3056187 3057323 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0480 - - gsj:114382008 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0480 6 3056187 3057323 Lal6g0480 6 3056187 3057323 ECH
Lal18g1148 18 14389948 14391132 Lal6g0480 6 3056187 3057323 LSH
Lal22g0446 22 2905341 2906549 Lal6g0480 6 3056187 3057323 LSH