Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0446 ATGGATTCTGGTAATAGTGGAAGTATCTCTTCTAGTGGTGATGAGGAATATTATTCACGAGTTGATCACACAACACTACTCCCTTCAAACATCCTCAATCATTCTCTCACCCAATTTGCTAAATCCTCGTCTTTTGTTTCTTCCCTTCAACACCAAATCCATCATAACAATCCATCTTTGTTTGATCTTTCATCTAGCTACCTCCACTCACTCTCTCAACCCCAACCAAACACAAATCCAAACTCTTTTCTAAATTTGGATACTACTACTAATTCTACATCTCAAGGAAAAAGATCTGAACCCAATTGCACCAACCCTGCAAACCTACAAGGTTTTAATCAAGGCTTGTTTCCACCACCTCATGGTCTTGGACATGATGACAATAACAATGCAAGGTTGGTTTCATCAGCACCTACCAATAATGCAGTAGTGCGGAACTCAAAGAAGAGAACTAGAGCTTCAAGAAGAACACCTACCACGGTTCTCACCACCGATACCTCAAATTTCAGGGCCATGGTTCAAGAATTCACTGGCATCCCTGCCCCACCCTTTTCAGGCTCGTCATCTTATTCTCGTACTCGCCGGCTTGACCTTCTCACCGGTTCCTCCTCTTCCTTAAGGGCCACGGCCTCTCATTATTTGGACACAACCCCATCTTTTTACCCTTTGCGTCCTTCACCACAAAAACCTCATCATCAACAAAACCCTTTTCCTTCAACTTTTTTGCATCATAATAATAATAACATGGTTGACGCTATAGCTTTTTCTATTACCAACAACAATAGCAACTCCATTAACTACCAACTACCACCTGATCTGGGTCTACCCTATCACCACAACCACTCACACAATATCATTCAAAGCATGCAACAAAATCACCTTTTTCAAACATTTCATCAAACACCCCCTCTTCATCCTTTAGGAAATCATGGCCTTTCAGTGTTCGGTGCAAAGTCTCAAGCAAGTTTATCCGTACAATCACTGGATGAACTTGGTATGAGCAATAATGCTGATATTGTTGGTGCTTATGGAGTATCAGGACCCCAAGTAAGTTCTGATCATGGAAATGGAGATAGAAGAGAGCTGAATTTTTCAACACCTTCTGCTGCATCAAGCAGATTGAACCATGAAAAGAATTTGGAGAATAATAGCAGTGCTAGTAATAGAGGAGAAGGTAACGTTGATTCGTGGATTTGTTCATCTGATTAG 1209 0.4119 MDSGNSGSISSSGDEEYYSRVDHTTLLPSNILNHSLTQFAKSSSFVSSLQHQIHHNNPSLFDLSSSYLHSLSQPQPNTNPNSFLNLDTTTNSTSQGKRSEPNCTNPANLQGFNQGLFPPPHGLGHDDNNNARLVSSAPTNNAVVRNSKKRTRASRRTPTTVLTTDTSNFRAMVQEFTGIPAPPFSGSSSYSRTRRLDLLTGSSSSLRATASHYLDTTPSFYPLRPSPQKPHHQQNPFPSTFLHHNNNNMVDAIAFSITNNNSNSINYQLPPDLGLPYHHNHSHNIIQSMQQNHLFQTFHQTPPLHPLGNHGLSVFGAKSQASLSVQSLDELGMSNNADIVGAYGVSGPQVSSDHGNGDRRELNFSTPSAASSRLNHEKNLENNSSASNRGEGNVDSWICSSD 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0446 402 MobiDBLite consensus disorder prediction 361 402 - -
Lal22g0446 402 MobiDBLite consensus disorder prediction 348 402 - -
Lal22g0446 402 PANTHER VQ MOTIF-CONTAINING PROTEIN 358 401 IPR039609 -
Lal22g0446 402 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 341 IPR039609 -
Lal22g0446 402 MobiDBLite consensus disorder prediction 70 103 - -
Lal22g0446 402 Pfam VQ motif 156 183 IPR008889 -
Lal22g0446 402 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 341 - -
Lal22g0446 402 PANTHER VQ MOTIF-CONTAINING PROTEIN 358 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0446 Lal-Chr22 2905341 2906549 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0446 - - gsj:114382008 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0446 22 2905341 2906549 Lal22g0446 22 2905341 2906549 ECH
Lal18g1148 18 14389948 14391132 Lal22g0446 22 2905341 2906549 LSH
Lal22g0446 22 2905341 2906549 Lal6g0480 6 3056187 3057323 LSH