Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1148 ATGAATTCTGGTAATAGTGGAAGTATCTCTTCTAGTGGTGATGAAGAATATGATTCACGAGTTGATCACACAACACTACTTACTTCAACCTTCCCCAATCATCCTCCTACCCAATTTGCTCAATCTTCATCGTTTCACACCCATCATCATTATAATCCATCTTTGTTTGATCTTTCATCAAGCTACCTCAACTCTCTCTCTCAATCTCAACCAAACACAAATCTAAACTCTTTTCTAAATTTGGATACCACTACTTCTGCATCTCAAGGCAAAAGATCTGAACCAAATTGCACCGACCCTACAAACCTACAAGGAGTTAACCAATGCTTGTTTCCACAACCTCATGGCCTTGGCCATGATGACAACAATGCAAGGGTGTTTTCAGTTTCAAGTTCAGTACCAACCAATAATGCAGCACGGAACTCAAAGAAGAGAACTAGAGCTTCAAGAAGAGCACCTACCACAGTTCTCACCACGGATACCTCAAATTTCAGAGCCATGGTTCAAGAATTTACTGGCATCCCTGCACCACCTTTTTCAGGCTCATCATCTTACTCTCTCACTCGCCGGCTTGACCTTCTCCCCGTTTCCTCCTCTTCCTTAAGGACCAGTGCATCTCATCACTTGGACACAACACCCTCTTTTAACCCTTTCCGTCCTTTACCACAAAAACTTCATCATCAACAAAACCCTCTTCCTTCAACGTTGTTGCATAATAATAACATGGTTGATGCTATAGCTTCTTCAAGTACCAACAACAACAATAACTTCATTAACTACCCACTACCACCACCTGATCTGGGTCTATCCTATCACAACCACTCGCAGAACATCATTCTAACCATTCAACAAAACCACCCTAATATTCATCCTCTAGGAAACCATGTCCTTTCTGGGTTTCATGTAAAGCCTCGAACAAGTTTATCCGTACAGTCACTTGAGGAACTTGGCATGAATCATCGCCAAGTGAATAATGCTGATCTTGTTGGTAGTGGGGTATCTGTACCCCAAGGTCATGGCCATGTAAGTTCTAATCACGCAAATGAAGATAGAAGAGAGATGGATTTTTCAAAAGCTTCTGTTGCATCAAGGAGCTTGAACCATGAAATGACTTTAGAGAATAATAGCACTAGTATTACTAGAGTGGAAGGTAACGTTGATTCGTGGATTTGTTCATCTGATTAG 1185 0.4135 MNSGNSGSISSSGDEEYDSRVDHTTLLTSTFPNHPPTQFAQSSSFHTHHHYNPSLFDLSSSYLNSLSQSQPNTNLNSFLNLDTTTSASQGKRSEPNCTDPTNLQGVNQCLFPQPHGLGHDDNNARVFSVSSSVPTNNAARNSKKRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPFSGSSSYSLTRRLDLLPVSSSSLRTSASHHLDTTPSFNPFRPLPQKLHHQQNPLPSTLLHNNNMVDAIASSSTNNNNNFINYPLPPPDLGLSYHNHSQNIILTIQQNHPNIHPLGNHVLSGFHVKPRTSLSVQSLEELGMNHRQVNNADLVGSGVSVPQGHGHVSSNHANEDRREMDFSKASVASRSLNHEMTLENNSTSITRVEGNVDSWICSSD 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1148 394 MobiDBLite consensus disorder prediction 338 358 - -
Lal18g1148 394 MobiDBLite consensus disorder prediction 344 358 - -
Lal18g1148 394 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 393 - -
Lal18g1148 394 MobiDBLite consensus disorder prediction 26 45 - -
Lal18g1148 394 MobiDBLite consensus disorder prediction 130 154 - -
Lal18g1148 394 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 393 IPR039609 -
Lal18g1148 394 Pfam VQ motif 151 178 IPR008889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1148 Lal-Chr18 14389948 14391132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1148 - - gsj:114382008 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1148 18 14389948 14391132 Lal18g1148 18 14389948 14391132 ECH
Lal18g1148 18 14389948 14391132 Lal22g0446 22 2905341 2906549 LSH
Lal18g1148 18 14389948 14391132 Lal6g0480 6 3056187 3057323 LSH