Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0470 ATGTCAAGGCCTCTGCAGAGAGGGGTGGCTGGGGTTAGGACTCCAGATTCCAAATCCAAAGATAAATTAGAAAAGGAAGATTGGGATAATAGGATAAGTTCTTCAGATCATAGCCCTCTATCCCCTTTTCGGTTACATTTTGCGGATAATAATTCTCATTCTAAATATGGCATCAATGAAAATGGTTTTGCTTCTGATCCCTTCATTGTTGGGACCCCTAGAAGCCGGGTTAAGTTGATGTTGCTTTTAATGAAGTTTAGTTTAGTGTTTATTGTTGTTCTTGCTCTCACTGGATCCTTTTGGTGGACTATGTCAATTTCGTCCTCATCAAGAGGTCACATTTACCATGGTTATAGAAGACTCCAAGAGAAACTTGTATCAGACCTGGTGGATATCAGTGAGTTAAGTAGAGGTCCATCAAAGTTTAAAGAATTGGAATCCTGTTCTGAGGAGCTCGAGAATTTTGTGCCTTGCTTCAATGTTTCTGAGAATCTAGCTCTCGGCAGTACTGATGGAAATGAGTTTGACCGGCAATGCAGTCGTGAGATCAGGCAATATTGTTTGGTTCTCCCGCCGGTGAATTACAAAATTCCTCTTCATTGGCCCACTGGAAGAGATGTCATCTGGAATGCTAATGTCAAAATCACTGCAGAGGAGGTTCTTTCTTCTGGAACATTGACCAAGAGGATGATGATGTTGGATGAGGAACAAATTTCATTTCGTTCAGCCTCTCATATGTTTGATGGTATTGAAGACTACTCACATCAAATTGCAGAAATGATGGGACTTAGAAATGAATCTTACTTCATACAAGCTGGGGTTCGAACAATACTGGACATAGGTTGTGGCTATGGTAGCTTTGGAGCGCATCTCTTTCACAGTCAGCTATTAACTATGTGCATTGCAAACTATGAGCCTTCTGGCAGTCAAGTTCAGCTCACTCTCGAGAGGGGTCTTCCTGCCATGATTGCTTCTTTCACTTCAAAACAGTTGCCATATCCGTCTCTCTCCTTTGATATGTTACATTGTGCATGGTGTGGCATTGATTGGGACAAGAAAGATGGCACTCTCTTGATTGAAGCTGATAGACTTCTAAAACCGGGTGGATACTTTGCCTGGACATCACCACTTATAAAATCACGTAACAAAGAGGATCAGAAAAGGTGGAAGTTGGTACAAGATTTTACAGAAAATCTTTGCTTCGAATTGTTGTCACAGCAAGATGCAACTGTCGTATGGAAGAAAACTAGTAAAAAGAGTTGCTATAGTTCAAGATTCTTAGCATTCCCTATTTTCACTAGCAGAAAGTCTAGTTCTGCCCCTCCCTTGTGTGGTAAAGGTCATGATGTGGAGACTCCATATTATCGAGATCTACAAAACTGCATAGGGGGAACACAAAGCAGCCGTTGGATTCCAATTGAAAAAAAGGAAAGATGGCCTTCTCGGGCTAACTTGAACAAGAACGAGCTTGCAGTCTATGGGTTGCAGCCTGATGAGTTTGCTGAGGACTCTGAGAGCTGGAGAACCGCGGTCCGTAATTACTGGTCACTCCTCTCTCCTTTAATTTTTTCTGATCATCCAAAGAGGCCTGGTGAAGAGGACCCTCCACCACCTTACAACATGTTCAGAAATGTGCTAGACATGAATGCTCATTTTGGTGGTTTTAATTCTGCTTTGCTGCAAGCTAGAAAGTCTGTGTGGGTGATGAATGTGGTCCCAGTAAGTGGGCTCAACTATCTTCCCCTGATACACGACAGAGGTTTCGTTGGCGTTTTGCATGATTGGTGTGAGGCCTTTCCAACATATCCTAGAACCTATGACTTGGTACATGCTGCTGGACTTCTATCCCTTGAAACTTCCCAGCCGCGGAGGTGCACGATGCTTGATGTGTTCATTGAAATTGATAGGGTTCTTCGTCCAGAGGGTTGGGTTATAATTCGCGATACAGTTCCTTTAATAGAATCGGCTAGAGCTCTAATAACCGAATTGAAGTGGGAAGCACGAGTGATAGAAATCGAAAGCGACAATGATCAGAGACTCTTGATCAGCCAGAAACCTTTCCATAAGAAACAAGCAAGCTAA 2082 0.427 MSRPLQRGVAGVRTPDSKSKDKLEKEDWDNRISSSDHSPLSPFRLHFADNNSHSKYGINENGFASDPFIVGTPRSRVKLMLLLMKFSLVFIVVLALTGSFWWTMSISSSSRGHIYHGYRRLQEKLVSDLVDISELSRGPSKFKELESCSEELENFVPCFNVSENLALGSTDGNEFDRQCSREIRQYCLVLPPVNYKIPLHWPTGRDVIWNANVKITAEEVLSSGTLTKRMMMLDEEQISFRSASHMFDGIEDYSHQIAEMMGLRNESYFIQAGVRTILDIGCGYGSFGAHLFHSQLLTMCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPYPSLSFDMLHCAWCGIDWDKKDGTLLIEADRLLKPGGYFAWTSPLIKSRNKEDQKRWKLVQDFTENLCFELLSQQDATVVWKKTSKKSCYSSRFLAFPIFTSRKSSSAPPLCGKGHDVETPYYRDLQNCIGGTQSSRWIPIEKKERWPSRANLNKNELAVYGLQPDEFAEDSESWRTAVRNYWSLLSPLIFSDHPKRPGEEDPPPPYNMFRNVLDMNAHFGGFNSALLQARKSVWVMNVVPVSGLNYLPLIHDRGFVGVLHDWCEAFPTYPRTYDLVHAAGLLSLETSQPRRCTMLDVFIEIDRVLRPEGWVIIRDTVPLIESARALITELKWEARVIEIESDNDQRLLISQKPFHKKQAS 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0470 693 Gene3D Vaccinia Virus protein VP39 239 423 IPR029063 -
Lal6g0470 693 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 59 691 - -
Lal6g0470 693 MobiDBLite consensus disorder prediction 1 36 - -
Lal6g0470 693 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 154 685 IPR004159 GO:0008168
Lal6g0470 693 MobiDBLite consensus disorder prediction 14 33 - -
Lal6g0470 693 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 59 691 IPR004159 GO:0008168
Lal6g0470 693 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 192 379 IPR029063 -
Lal6g0470 693 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 502 652 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0470 Lal-Chr6 2995091 3002965 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0470 K23870 - gmx:100787635 1125.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0470 6 2995091 3002965 Lal6g0470 6 2995091 3002965 ECH
Lal22g0444 22 2890364 2895958 Lal6g0470 6 2995091 3002965 LSH
Lal6g0470 6 2995091 3002965 Lal17g0406 17 2736697 2745088 PCT
Lal17g0406 17 2736697 2745088 Lal6g0470 6 2995091 3002965 PCT