Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0444 ATGTCAAAGCCTCTTCAGAGAGGGGTATCTGGGGTAAGGACTCCTGATTCCAAATCCAAAGATAAATCAGAAAAGGAAGATTGGGATAATAGGAGAGCTTCTTCAGATCACAGTCCTATGTTCCCTTTTCGGTTGCTTTTTGCAGATAATAATTCTCATTCTAAATATGGAATCAATGAAAATGGTTTTGCTTCTGATCCCTTCATTGTTAGTAACCCGAGAAGCCGGCTTAAATTGACATTGCTGTTTTTGAAGTTTAGTTTAGTGATTATAGTTGTTCTTGCTCTCACTGGATCCTTTTGGTGGACGATGTCGATTTCCGCCTCATCAAGAGGTCACATTAGCCATGGTTATAGAAGACTCCAAGAGAAACTTGTATCGGACTTGGTTGATATTAGCGAGTTTAGTCGTGGTGCATCTAAGTTTAAAGAATTGGAATCCTGTTCAGAGGAGCATGGAAATTTTGTGCCTTGCTTTAATGTTTCTGAGAATCTAGCTCTGGGTAACTCTGATGGGAATGAGTTCGATCGACAATGCGGCCGTGAGCTCAGGCTAGATTGTTTGGTTCTTCCACCGGTGAATTACAAAATTCCTCTTAGGTGGCCTACGGGGAGAGATGTCATCTGGATTGCAAATGTGAAAATCACCGCAGAAGAAGTTCTTTCTTCTGGAACCTTGACCAAGAGGATGATGATGCTGGATGAAGAGCAAATTTCTTTTCGTTCAGCCTCTCATATGTTTGATGGTATTGAAGACTACTCACATCAAATTGCAGAAATGATGGGACTTAGAAATGAATCTTACTTCATTCAAGCTGGGGTTCAAACAATACTGGACATTGGTTGTGGCTATGGTAGCTTTGGAGCGCACCTCTTTCACAGTCAACTTTTGACTACGTGCATCGCAAACTATGAGCCTTCTGGCAGTCAAGTTCAGCTCACTCTCGAGAGGGGTCTTCCTGCAATGATTGCTTCTTTCACTTCAAAACAGTTGCCATATCCGTCTCTCTCCTTTGATATGTTACATTGTGCATGGTGTGGCATTGATTGGGACCATAAAGATGGCGTTCTTTTGATTGAAGCTGATAGACTTTTAAAACCGGGTGGATACTTTGTCTGGACATCACCACTTATAAAGTCACGTAACAAAGAGGATCAGAAAAGGTGGAAGTTCATACACGATTTTACCGAAAATCTTTGCTGGGAAATGTTGTCACAGCAAGATGCAACTGTTGTATGGAAGAAAACTAGTAAAAGGAGTTGCTATAGTTCAAGAAAGTCTAGTTCTGCCCCTCCTTTGTGTAGTAAAGGTTATAACGTGGAGAGTCCATATTATCGAGAACTCCAAAACTGCATAGGAGGAACGCAGAGCAGCCGTTGGATTCCAATTGAGAAAAGGGAAAGATGGCCTTCTCGAGCTAACTTGAACAAGAACGAGCTCGCAGTCTACGGGTTACAGTCTGATGAATTCGCCGAAGACTCTGAAAGCTGGAGAACAGCAGTCCGTAATTACTGGTCACTCCTGTCTCCATTGATATTTTCGGATCATCCAAAGAGGCCCGGTGAAGAGGACCCTCCACCACCTTACAACATGTTCAGAAATGTGCTTGACATGAATGCTCATTTTGGTGGTTTTAACTCTGCCTTGCTGCAAGCTAGGAAGTCTGCCTGGGTGATGAATGTCGTCCCAATAAGCGGGCTCAACTATCTTCCTCTGATCCATGACAGAGGATTCATAGGGGTTTTGCATGATTGGTGTGAAGCCTTTCCAACATATCCTAGAACCTATGACTTGGTGCATGCAGCTGGACTTCTATCCCTTGAAACTTCTCAGCAGCACAGGTGCACGATGCTTGATATGTTCATCGAAATTGATAGGATACTTCGCCCGGAGGGTTGGGTTATAATTAGAGATACAGTTCCTTTAATAGAATCAGCTAGAGTTCTAATAACACAGCTGAAGTGGGAAGCAAGAGTGATAGAAATTGAAAGTGACAATGATCAGAAACTCTTGATCAGCCAGAAACCTTTCTATAAGAAACAGGCAAACTAA 2052 0.425 MSKPLQRGVSGVRTPDSKSKDKSEKEDWDNRRASSDHSPMFPFRLLFADNNSHSKYGINENGFASDPFIVSNPRSRLKLTLLFLKFSLVIIVVLALTGSFWWTMSISASSRGHISHGYRRLQEKLVSDLVDISEFSRGASKFKELESCSEEHGNFVPCFNVSENLALGNSDGNEFDRQCGRELRLDCLVLPPVNYKIPLRWPTGRDVIWIANVKITAEEVLSSGTLTKRMMMLDEEQISFRSASHMFDGIEDYSHQIAEMMGLRNESYFIQAGVQTILDIGCGYGSFGAHLFHSQLLTTCIANYEPSGSQVQLTLERGLPAMIASFTSKQLPYPSLSFDMLHCAWCGIDWDHKDGVLLIEADRLLKPGGYFVWTSPLIKSRNKEDQKRWKFIHDFTENLCWEMLSQQDATVVWKKTSKRSCYSSRKSSSAPPLCSKGYNVESPYYRELQNCIGGTQSSRWIPIEKRERWPSRANLNKNELAVYGLQSDEFAEDSESWRTAVRNYWSLLSPLIFSDHPKRPGEEDPPPPYNMFRNVLDMNAHFGGFNSALLQARKSAWVMNVVPISGLNYLPLIHDRGFIGVLHDWCEAFPTYPRTYDLVHAAGLLSLETSQQHRCTMLDMFIEIDRILRPEGWVIIRDTVPLIESARVLITQLKWEARVIEIESDNDQKLLISQKPFYKKQAN 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0444 683 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 154 675 IPR004159 GO:0008168
Lal22g0444 683 MobiDBLite consensus disorder prediction 1 35 - -
Lal22g0444 683 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 50 681 IPR004159 GO:0008168
Lal22g0444 683 Gene3D Vaccinia Virus protein VP39 239 426 IPR029063 -
Lal22g0444 683 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 50 681 - -
Lal22g0444 683 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 494 642 IPR029063 -
Lal22g0444 683 MobiDBLite consensus disorder prediction 14 34 - -
Lal22g0444 683 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 271 414 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0444 Lal-Chr22 2890364 2895958 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0444 K23870 - gmx:100787635 1110.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0444 22 2890364 2895958 Lal22g0444 22 2890364 2895958 ECH
Lal22g0444 22 2890364 2895958 Lal6g0470 6 2995091 3002965 LSH
Lal22g0444 22 2890364 2895958 Lal17g0406 17 2736697 2745088 PCT
Lal17g0406 17 2736697 2745088 Lal22g0444 22 2890364 2895958 PCT