Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0406 ATGTCAAGGCCTCTGTACCGAGGTGTTTCGGGGATTCGGATCCCTGAAAACAGCTATGACTACACATTGGACTCAGACTCACAATATAAAGATAAAACAGATAAGGAAGATTTTGATAGAAGGGGTTCTTCAAATCATAATAGCCCTTTACTAAAGCCCTTGAGGTTACTTTTTTCACCAAGTCCTCATTCTAAATATGGTATAACTGAGAATGGTTTCTCATCTGATCCATTCCTTGTTGGCACCCCGAGAAATCGGCATCAATTAGTTCTGTTTCTTTTGAAGTTTAGTTTAGTATTTATAATTATTCTTGCTCTTGCTGGGTCTTTTTGGTGGACAATCTCAATTTCAACTTCATCAAGAGGTCACATTTACCATGGTTATAGAAGAATCCAGGAGAAACTTATGTTGGACCTGATGGATATTGGAGAGATTTCTTATGCTCCCTCAAGGATGAAAGTATTGGATTTCTGTTCACAGGAGTTCGAAAACTATGTTCCTTGCTTTAATGTTTCTGACAGATTAGCTCTTGGTTACTCTGACGGCAATGAGTTTGACCGGCAATGTGACCATGAGCCAAGACAAGATTGTTTAGTTCTCTCACCAGTGAATTACAAAATTCCTCTACGGTGGCCTACTGGAAAGGATGTTATCTGGGTTGCCAATGTTAAAATCTCAGCACAGGAAGTTCTTTCTTCTGGAAGCTTGACCAAGAGGATGATGATGCTTGATGAAGAGCAAATTTCTTTTCGTTCAGCCTCTCTTATGTTTGATGGCGTTGAAGACTACTCACATCAAATTGCAGAAATGATTGGACTTAGAAATGAATCTAACTTCATACAAGCTGGGGTTAGAACCATATTGGACATCGGTTGTGGCTATGGTAGTGTTGGAGCTCACCTCTTCAACAGTCAGCTTTTAACTATGTGCATTGCAAACTATGAGCCTTCAGGCAGTCAAGTTCAGTTTACACTTGAGAGGGGTCTTCCTGCTATGATTGCTTCTTTCTCTTCAAAACAGTTGCCTTTTCCATCTCTCTCCTTTGATATGTTGCATTGCGCATGGTGTGGCATTGATTGGGACCAGAAAGATGGTCTTCTCTTAATGGAAGCTGATAGACTTTTAAAACCGGGTGGCTACTTTGTATGGACTTCACTGCTTACAAATACTCGTAACAAAGACATCCAAAAAAGGTGGAAGTTCGTACATGAGTATACTGAAAATCTTTGCTGGGAAATGCTGTCACAGCAAGATGAAACTGTCGTATGGAAGAAAACTAGTAAAAAGAATTGTTATAGCAAAAGAAAGACTGCTTCCCCCCCTCCTCTATGTGGTGGAGGCTATGATGTGGAGTCTCCATATTATCGAGACCTTCAAAATTGCATAGGAGGAACACACAGCAGCCGCTGGATTTCTATTGAAGAGAGGGCAACCTGGCCCTCCCGGGATATCTTGAAAAAGGACGAGCTTGCAATCTATGGGCTGCAATCAGATGAATTTGCTGAGGACTTTGAAAGCTGGAGAACTGCAGTCCATAATTATTGGTCTCTTCTGTCACCTTTAATATTTTCTGATCATCCAAAGAGGCCTGGTGATGAGGACCCTCAGCCACCTTACAACATGCTAAGAAATGTGCTAGACATGAATGCTCATTTGGGAAATTTTAATTCTGCATTGTTGCAAGCTGGAAAGTCTGTGTGGGTCATGAATGTGGTCCCCACGAGTGGACCCAACTATCTTCCCTTGATCAAGGACCGGGGTTATGTCGGCGTTTTGCATGATTGGATGTTCCGGTTGCTAGAGCCTGATGGTTTTCCGTTCGCTCCGCTAGAGGGGAATCCAGAGAGAACGAGAGTGCTTCTGATGTTCCTTTTGTCAAAGTGTGAGGCATTCCCAACGTACCCTAGAACCTATGACTTGGTGCACGCAGCAGGACTTCTATCCCTTGAAACTTCTCAACACCACAGATGCACAGTGTTTGATCTTTTCATTGAAATTGACAGGTTACTTCGGCCCGAGGGTTGGATTATATTCCATGACACGGTACCTTTAATTGAGTCAGCTAGAGTTCAAACTACTCGGCTGAATTGGGATGCACGAGTAATAGAAATTGAAAGTGACAGTGATCAGAGACTCCTGATCTGCCAGAAACCTTTCTCTAAGAAACAGGCCAAATAA 2178 0.4224 MSRPLYRGVSGIRIPENSYDYTLDSDSQYKDKTDKEDFDRRGSSNHNSPLLKPLRLLFSPSPHSKYGITENGFSSDPFLVGTPRNRHQLVLFLLKFSLVFIIILALAGSFWWTISISTSSRGHIYHGYRRIQEKLMLDLMDIGEISYAPSRMKVLDFCSQEFENYVPCFNVSDRLALGYSDGNEFDRQCDHEPRQDCLVLSPVNYKIPLRWPTGKDVIWVANVKISAQEVLSSGSLTKRMMMLDEEQISFRSASLMFDGVEDYSHQIAEMIGLRNESNFIQAGVRTILDIGCGYGSVGAHLFNSQLLTMCIANYEPSGSQVQFTLERGLPAMIASFSSKQLPFPSLSFDMLHCAWCGIDWDQKDGLLLMEADRLLKPGGYFVWTSLLTNTRNKDIQKRWKFVHEYTENLCWEMLSQQDETVVWKKTSKKNCYSKRKTASPPPLCGGGYDVESPYYRDLQNCIGGTHSSRWISIEERATWPSRDILKKDELAIYGLQSDEFAEDFESWRTAVHNYWSLLSPLIFSDHPKRPGDEDPQPPYNMLRNVLDMNAHLGNFNSALLQAGKSVWVMNVVPTSGPNYLPLIKDRGYVGVLHDWMFRLLEPDGFPFAPLEGNPERTRVLLMFLLSKCEAFPTYPRTYDLVHAAGLLSLETSQHHRCTVFDLFIEIDRLLRPEGWIIFHDTVPLIESARVQTTRLNWDARVIEIESDSDQRLLICQKPFSKKQAK 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0406 725 MobiDBLite consensus disorder prediction 25 43 - -
Lal17g0406 725 Gene3D Vaccinia Virus protein VP39 258 438 IPR029063 -
Lal17g0406 725 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 21 596 IPR004159 GO:0008168
Lal17g0406 725 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 624 723 IPR004159 GO:0008168
Lal17g0406 725 MobiDBLite consensus disorder prediction 23 47 - -
Lal17g0406 725 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 624 717 IPR004159 GO:0008168
Lal17g0406 725 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 164 595 IPR004159 GO:0008168
Lal17g0406 725 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 623 697 IPR029063 -
Lal17g0406 725 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 260 401 IPR029063 -
Lal17g0406 725 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 624 723 - -
Lal17g0406 725 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 21 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0406 Lal-Chr17 2736697 2745088 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0406 K23870 - gmx:100812530 1159.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0406 17 2736697 2745088 Lal17g0406 17 2736697 2745088 ECH
Lal22g0444 22 2890364 2895958 Lal17g0406 17 2736697 2745088 PCT
Lal6g0470 6 2995091 3002965 Lal17g0406 17 2736697 2745088 PCT
Lal17g0406 17 2736697 2745088 Lal22g0444 22 2890364 2895958 PCT
Lal17g0406 17 2736697 2745088 Lal6g0470 6 2995091 3002965 PCT