Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0461 ATGCAGAGGCGAAGATGGATACCGTTGGTGCTGCTGAGGAAGTTTCTAAGTGCAGCCATTTGCGCAATTGCGTTTATGGCTCTCTTCTCTGTTCATGTTCACCTTTTCCCTTCTTCTAAACCCAAGGATCACAAGTTCAATGATAAGATCCACACGACCCATGATCTGCAAAGCTGGACGCAAGAGCTGGCTCCTCCTCATTTGTACCATTTGTCCAAAGATCCACTTCCCACTTCCAAGATTGAGAATTTGAATGGTTCAAAAGGGAATTCTGATTATGAGAAGCTTTGGAAGCCTCCATCAAATCGTGGGTTTCTACCCTGTACAAATCATACTCCTAATTATACCACTCCAGCTGAGTCAAGAGGATACCTTTTAGTTCATACAAACGGTGGGCTCAACCAAATGCGTGCTGGGATATGTGATATGGTAGCTGTAGCTCGTATTGTTAATGCTACTCTTGTCATTCCTGAACTTGATAAAAGATCATTTTGGCAAGATACTAGCAATTTCTCTGATGTTTTTGATGAAGAGCATTTTATAAGTTCTCTAGCTAACGATGTAAAAATCATTGAGAAGCTTCCCAATGAACTGCTTAACGAAACACGGGTGGTCAAACAATTTGTAAGCTGGTCTGGTATGGATTACTATGAGAATGAAATTGCTAGCTTGTGGGAAGATTTCCAAGTTATTCGAGCTTCCAAATCTGATTCACGATTAGCGAACAACAATCTACCCCCGGACATTCAGAAGCTTCGCTGTCGTGCTTGTTATGAGGCTCTTCGTTTCTCTCCCCGCATTGAGAAAATGGGAAAATTGTTGGTGGAGAGGATGAGATCATTTGGTCCTTATATTGCATTGCATTTACGTTTTGAGAAGGATATGCTTGCATTTAGTGGATGCACACACGATTTATCCCCGGACGAGGCTGAAGAGCTACGCATGATCAGAGAGAACACTTCCTATTGGAAGATAAAGGACATTGATCCCAAATATCAAAGGTCCAAAGGGTATTGTCCCTTGACTCCAAAGGAAGTTGGTATTTTTCTTACTGCTCTTGGATACCCATCAAAGACTCCAGTATATATTGCTGCTGGAGAGATATATGGGGGCGAATCTCATATGGCTGAATTGCGGTACCGCTATCCCTTGATAATGAGCAAGGAAAAATTAGCATCCATTGAAGAGCTTGAACCCTTTTCTAATCATGCATCTCAAATGGCTGCTCTTGACTATATTGTATCTATTGAAAGTGATGTATTTATACCTTCTTATTCTGGAAACATGGCAAGGGCTGTTGAAGGTCATCGTCGTTTTCTTGGACGTGGCAGAACAATATCTCCAGACAGGAAAGCCCTTGTTCGTCTGTTTGATAAACTAAATCAGGGAACAATGTCTGAAGGTAAAAATCTTTCAAATAGGATTTTTGATCTCCACAGACGAAGACTTGGCTCTCCCAGGAAGAGAAAAGGGCCAATTTCTGGAACAAAGGGCATGGAAAGGTTTCGGTCGGAAGAAGCCTTTTATGCTAATCCCTTACCTGATTGTTTATGCAGGACAGAACCACCACATGTAAACATCTCTCACATTATTAGGTAG 1599 0.4171 MQRRRWIPLVLLRKFLSAAICAIAFMALFSVHVHLFPSSKPKDHKFNDKIHTTHDLQSWTQELAPPHLYHLSKDPLPTSKIENLNGSKGNSDYEKLWKPPSNRGFLPCTNHTPNYTTPAESRGYLLVHTNGGLNQMRAGICDMVAVARIVNATLVIPELDKRSFWQDTSNFSDVFDEEHFISSLANDVKIIEKLPNELLNETRVVKQFVSWSGMDYYENEIASLWEDFQVIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPRIEKMGKLLVERMRSFGPYIALHLRFEKDMLAFSGCTHDLSPDEAEELRMIRENTSYWKIKDIDPKYQRSKGYCPLTPKEVGIFLTALGYPSKTPVYIAAGEIYGGESHMAELRYRYPLIMSKEKLASIEELEPFSNHASQMAALDYIVSIESDVFIPSYSGNMARAVEGHRRFLGRGRTISPDRKALVRLFDKLNQGTMSEGKNLSNRIFDLHRRRLGSPRKRKGPISGTKGMERFRSEEAFYANPLPDCLCRTEPPHVNISHIIR 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0461 532 Pfam GDP-fucose protein O-fucosyltransferase 124 439 IPR019378 -
Lal6g0461 532 PIRSF UCP009360 1 522 IPR024709 -
Lal6g0461 532 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 4 530 - -
Lal6g0461 532 CDD O-FucT_plant 124 445 IPR024709 -
Lal6g0461 532 PANTHER OS02G0726500 PROTEIN-RELATED 4 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0461 Lal-Chr6 2924488 2929767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0461 62 522 Miscellaneous Gene Families AT1G22460 69.631 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0461 - - gmx:100795727 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0461 6 2924488 2929767 Lal6g0461 6 2924488 2929767 ECH
Lal6g0461 6 2924488 2929767 Lal17g0400 17 2701883 2707308 PCT
Lal6g0461 6 2924488 2929767 Lal4g0355 4 2410694 2415163 PCT
Lal17g0400 17 2701883 2707308 Lal6g0461 6 2924488 2929767 PCT
Lal4g0355 4 2410694 2415163 Lal6g0461 6 2924488 2929767 PCT