Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0355 ATGCAGAAGCGTAGAACGGTTCCATTGGGCATTTTAAGAAGGTTTCTGGCTGCAACCATGTGTTCAATATGTATTACGTCTTTGTTCTTAGTCCATGTTCATTTTTATCATCCCCACACTGGTCATAAGTTCAATGACATGTTCCTCACGTTTCATGATCCACAAAGCTGGATAAGAGAGCTTGCTCCACCCCGTTATTCCAAGGTTCCAATTTTTCCTCCCAAGTTGAAGGATTCAATTGGGGATTCAGATTATGAGAAACTGTGGAAACCTCTATCAAATAATGGTTTTTTGCCCTGTACAAAGCCTAGTTCTAATTACACAGCTCCTGCGGAGTCACGAGGTTATCTTTCAGTTCATACAAACGGTGGGCTCAATCAAATGCGTACCGGGATATGTGATATGGTAGCTATAGCTCGAATTATAAATGCCACTCTTGTAATTCCAGACCTTGACAAAAGCTCATTCTGGCAAGATACTAGCAATTTCTCTGATATCTTTGATGAAGAGTGGTTTATCAGTTCTCTTGCTAATGATGTAAAAATCATTAAGAAGCTTCCCAAAAGTCGAACTAAACCAACCAGAATTGTCAAACAATTTAAAAGCTGGTCTGGTATGGTTTACTATGAGAATGAGATAGCTTCCATGTGGGATCATTTTAAGGTTATTCGAGCTTCCAAATCTGATTCACGGTTAGCAAATAACAATCTACCTCCAGACATTCAGAGGCTTCGCTGTCGAGCTTGTTACGAAGCTCTTCGTTTCTCTCCTCGCATTGAACAAATGGGAAAAATGTTGGTAGAGAGGATGAGGTTATTTGGTCCTTATATTGCATTGCATTTACGTTATGAGAAGGATATGCTTGCATTTAGTGGCTGCACACATGATTTATCTACAGCTGAAGCTGAAGAATTGAAGATTATCAGAAAAGGAACCAATTATTGGAAAAGAAAGGATATTGATCCCTTAGAGGAGAGGTCTAAAGGGTTTTGCCCCTTAACTCCAAAGGAAGTTGGAATTTTTCTTACAGCTCTTGGATACCCATCAAAGACTCCAATATACATTGCAGCTGGGGAGATATATGGTGGTGAGTCTCATATGACTGAACTGCGATCCCGCTATCCATTGCTACTAAGCAAGGAAAAATTGGCATCAATTGAGGAACTTGGACCCTTTACTAATCATGCATCACAAATGGCTGCTCTTGATTATATTGTATCAATTGAAAGTGATGTATTTGTACATTCTTATCCTGGAAACATGGCAAGGGCGGTCGAAGGTCATCGCCGATTTCTCGGGCGTGGAAGAACAATATCTCCAGACAGGAAAGCACTTGTTCGTCTATTTGATAACCTTGCTAATGGAACAATGACTGAAGGGAAAACTCTATCAAACAAAGTTATTGATCTCCACAAAAAACGACTTGGGTTGTTGAGGAAGAGAAAAGGGGCGATTTCAGGAACAAAGGGTGCAGAGAGGCTTCGGTCAGAAGAATCATTTTATGCAAATCCTTCACCTGATTGCTTTTGTCGGACAGAGTCAACTACTCAGCTAGATGTGATGTGA 1566 0.4036 MQKRRTVPLGILRRFLAATMCSICITSLFLVHVHFYHPHTGHKFNDMFLTFHDPQSWIRELAPPRYSKVPIFPPKLKDSIGDSDYEKLWKPLSNNGFLPCTKPSSNYTAPAESRGYLSVHTNGGLNQMRTGICDMVAIARIINATLVIPDLDKSSFWQDTSNFSDIFDEEWFISSLANDVKIIKKLPKSRTKPTRIVKQFKSWSGMVYYENEIASMWDHFKVIRASKSDSRLANNNLPPDIQRLRCRACYEALRFSPRIEQMGKMLVERMRLFGPYIALHLRYEKDMLAFSGCTHDLSTAEAEELKIIRKGTNYWKRKDIDPLEERSKGFCPLTPKEVGIFLTALGYPSKTPIYIAAGEIYGGESHMTELRSRYPLLLSKEKLASIEELGPFTNHASQMAALDYIVSIESDVFVHSYPGNMARAVEGHRRFLGRGRTISPDRKALVRLFDNLANGTMTEGKTLSNKVIDLHKKRLGLLRKRKGAISGTKGAERLRSEESFYANPSPDCFCRTESTTQLDVM 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0355 521 CDD O-FucT_plant 116 437 IPR024709 -
Lal4g0355 521 PIRSF UCP009360 2 514 IPR024709 -
Lal4g0355 521 Pfam GDP-fucose protein O-fucosyltransferase 116 431 IPR019378 -
Lal4g0355 521 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 3 516 - -
Lal4g0355 521 PANTHER OS02G0726500 PROTEIN-RELATED 3 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0355 Lal-Chr4 2410694 2415163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0355 60 513 Miscellaneous Gene Families AT1G22460 66.740 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0355 - - gmx:100807411 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0355 4 2410694 2415163 Lal4g0355 4 2410694 2415163 ECH
Lal17g0400 17 2701883 2707308 Lal4g0355 4 2410694 2415163 LSH
Lal6g0461 6 2924488 2929767 Lal4g0355 4 2410694 2415163 PCT
Lal4g0355 4 2410694 2415163 Lal6g0461 6 2924488 2929767 PCT