Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0260 ATGGCTAAACCTTCACACGATGTTGAGTTTCATAAATACAACAATAATAACGGTCTCAATGTCACTGAGTCCGAAACCGAGTTAGGTTTCCCTTCTGAGTTCCCGTACGAGTTTGACTCGTTCGCGTTGGGTCATCAGATCTCACCGCCGGATTCTCTAGTCTGTTCCACTAAAACAGCGAGCAATGAGGAGGAGGACTTCTTCGCCGGGTTGAATCGCCGGCTGAGTCAAGCTTCTCTTCACGAAACTCGCCAGAGTCAACACACTGTTCCCATCCACAATAGCAACAAAACCGAGATTCAGAAGAAGGTTCTGGTCATATTCGGGTCTCCCGAGACAACATTGATTGGTAGAAGAGATTGGTCGGGTCAGAGTCCCGGGTCGGGCGATGTAAGTCTAAACGGATCTTCTCGTGTTCCTTCTCCAAATACGACAGCGTTTTCAAACGACGCTTGGGATGCCATATATGCCGCCGCAGAACAAGTTTCGAGGTTGAAGATAAACGGCGACGTTTCGAATCTCTATTATCAGAATAGAGCACAGTGTGGTTTCCCTCCACACGGTGCTACTGAGAATGCCGCTCAGTTTTTCAATAACAATAATCTCAACCAAACGTCACATGTGACTTATCTTCAGTTGAAGCAGGAGCAGATTAATACTCGAATTCAGATGCTGAAACAACAGTGTGATGCTGTACGAGGAGTAGAAACTGAGCCTTATTTCTCAAGTTATCAGCAGCAGCTTGAAGTCCAGAACAAGCGTCATGAGTTTGGGTATGGGAGTGTGAAATGCACGCACCCTTTGCCTAAAACTACATGGCACCCTCTTCAAGTGAAGAACAAAAATCAACAGCTCCAACCTATTGGCGGATCCAGTTCAAGATCCGTTTTAAATGGTGGATCTAGTGACAAAAGGGTTTGTGCTGGAACTGGTGTGTTCTTGCCTCGCTCATATATGGTTCCGCCTGAGCATTGCAAGAAATCAAATTGTGCTCCTCTAAACTTGAATATCGATGACCTGAATGCCACAACTCAACAACGCTTTGCAAATGCTTATAGTTCAGATTGCAATGAGTTATTAGCGAGAAGAAATGCGATTCAAATGCAGCAGAAGTTGTGCTTGCGACGAGAAGATAAAGCAAGCTATGAGATCCGTCTGCCTCAGGAATGGACTTATTGA 1179 0.4538 MAKPSHDVEFHKYNNNNGLNVTESETELGFPSEFPYEFDSFALGHQISPPDSLVCSTKTASNEEEDFFAGLNRRLSQASLHETRQSQHTVPIHNSNKTEIQKKVLVIFGSPETTLIGRRDWSGQSPGSGDVSLNGSSRVPSPNTTAFSNDAWDAIYAAAEQVSRLKINGDVSNLYYQNRAQCGFPPHGATENAAQFFNNNNLNQTSHVTYLQLKQEQINTRIQMLKQQCDAVRGVETEPYFSSYQQQLEVQNKRHEFGYGSVKCTHPLPKTTWHPLQVKNKNQQLQPIGGSSSRSVLNGGSSDKRVCAGTGVFLPRSYMVPPEHCKKSNCAPLNLNIDDLNATTQQRFANAYSSDCNELLARRNAIQMQQKLCLRREDKASYEIRLPQEWTY 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0260 392 PANTHER TIP41-LIKE PROTEIN 25 392 - -
Lal6g0260 392 MobiDBLite consensus disorder prediction 117 144 - -
Lal6g0260 392 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1-LIKE 25 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0260 Lal-Chr6 1699229 1701120 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0260 - - lang:109359416 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0260 6 1699229 1701120 Lal18g1347 18 15902430 15904377 ECH
Lal9g1629 9 18687618 18690785 Lal6g0260 6 1699229 1701120 ECH
Lal2g1880 2 21085911 21089074 Lal6g0260 6 1699229 1701120 ECH
Lal6g0260 6 1699229 1701120 Lal6g0260 6 1699229 1701120 ECH
Lal18g1347 18 15902430 15904377 Lal6g0260 6 1699229 1701120 LSH
Lal22g0251 22 1564673 1566963 Lal6g0260 6 1699229 1701120 LSH
Lal3g0564 3 4272930 4274843 Lal6g0260 6 1699229 1701120 PCT
Lal5g1148 5 14204788 14207076 Lal6g0260 6 1699229 1701120 PCT
Lal18g1347 18 15902430 15904377 Lal6g0260 6 1699229 1701120 PCT
Lal6g0260 6 1699229 1701120 Lal3g0564 3 4272930 4274843 PCT
Lal6g0260 6 1699229 1701120 Lal5g1148 5 14204788 14207076 PCT
Lal6g0260 6 1699229 1701120 Lal18g1347 18 15902430 15904377 PCT