Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1148 ATGTCTAAAGCCACTGATGAAGCGTTGTTGTGGCCCCTACGCAACAAAAGCAACAACGTTGTCAACAACTTCGATTTGTTTGGCTTCCCTTCTGAGTTCCCTTACGAGTTGGGTATTTCCTCGCCGGTTGAGTCCGTTGCGGGGTCCACCGAAACCGACAGCAGCAACGAGGAAGAAGACTTCTTCGCCGCTTTAACTCGCCGCCTGAGTCAGTCATCGCTTCACGACTCTCGCAAACACCACCCACTCACTTCACCAATCATTGCTAATAACAAAAATGAGAATGTGAAGCTGAAGACACAGGGTTTAGCCACATCGCCACAGTCTACGCTGAGTGGAATCGGAAGCTGGTCCGGTCGCAGTGGTGGCTCAGGTGACGGAAGCCCAAATGGGTCCTCACGAGTTCCGTCACCGTTAACGACACCGTTTGTTGAAAAAAATGACCCATTGGAAGCTATTTACGCAGTTGCAGGTGAAGTTGCAAGGTTGAAGTATATAAATAGTGAAACGATGTCGTTTGGTTTTCAGAATAGAGGGCAACTTGGTCTCCCTCATGGTTCTACTTTGTTCCCCAACCATGCTTCTCAGATGAGAGAGGAACAGTGTGGTGACTCTGTTTGGGGAAGACAACATGTTAAGCCTAACTGGTTGATTCAGCAACAACAGCTACAAGTTCAGAATAGAGGGTATGAGAGTGTGAAATGCACGCGCCCTTCTTTGCCTCAATCTGCATGGCCCCCACTTCAGGTTCAACCCCAAAATCAACGGCTACAATGTACTGGATCGGGTTCAAGACCAAGTGGATCTGCTGTGAAAAGGGGTTGTGGTGGAACTGGAGTGTTCTTACCTCGCCATCATGTGAACAATCCTTCAGAAACTCGCAAGAAACCTGGTTTTGCTCCGGTTTTGGTTCCAGCAAAGGTTGTTCATGCTCTGAATGTAACTAGTCAATCACAGTTCTCAAATGCTTTTGCCGTAGACTATGATGCATTGTTGGCAAGGAGAAACGCTCTTCTCATGCAGAAGCAGAGAATGAGTTTACGCCGAGAAGAGGTGACTAGCTATGAAACTCGCCTTCCACAGGAATGGACCTACTGA 1098 0.48 MSKATDEALLWPLRNKSNNVVNNFDLFGFPSEFPYELGISSPVESVAGSTETDSSNEEEDFFAALTRRLSQSSLHDSRKHHPLTSPIIANNKNENVKLKTQGLATSPQSTLSGIGSWSGRSGGSGDGSPNGSSRVPSPLTTPFVEKNDPLEAIYAVAGEVARLKYINSETMSFGFQNRGQLGLPHGSTLFPNHASQMREEQCGDSVWGRQHVKPNWLIQQQQLQVQNRGYESVKCTRPSLPQSAWPPLQVQPQNQRLQCTGSGSRPSGSAVKRGCGGTGVFLPRHHVNNPSETRKKPGFAPVLVPAKVVHALNVTSQSQFSNAFAVDYDALLARRNALLMQKQRMSLRREEVTSYETRLPQEWTY 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1148 365 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1-LIKE 26 365 - -
Lal5g1148 365 MobiDBLite consensus disorder prediction 102 140 - -
Lal5g1148 365 MobiDBLite consensus disorder prediction 102 143 - -
Lal5g1148 365 MobiDBLite consensus disorder prediction 73 92 - -
Lal5g1148 365 PANTHER TIP41-LIKE PROTEIN 26 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1148 Lal-Chr5 14204788 14207076 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1148 - - lang:109330255 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0251 22 1564673 1566963 Lal5g1148 5 14204788 14207076 ECH
Lal9g1629 9 18687618 18690785 Lal5g1148 5 14204788 14207076 ECH
Lal2g1880 2 21085911 21089074 Lal5g1148 5 14204788 14207076 ECH
Lal5g1148 5 14204788 14207076 Lal5g1148 5 14204788 14207076 ECH
Lal3g0564 3 4272930 4274843 Lal5g1148 5 14204788 14207076 LSH
Lal5g1148 5 14204788 14207076 Lal18g1347 18 15902430 15904377 LSH
Lal5g1148 5 14204788 14207076 Lal18g1347 18 15902430 15904377 PCT
Lal5g1148 5 14204788 14207076 Lal22g0251 22 1564673 1566963 PCT
Lal5g1148 5 14204788 14207076 Lal6g0260 6 1699229 1701120 PCT
Lal18g1347 18 15902430 15904377 Lal5g1148 5 14204788 14207076 PCT
Lal22g0251 22 1564673 1566963 Lal5g1148 5 14204788 14207076 PCT
Lal6g0260 6 1699229 1701120 Lal5g1148 5 14204788 14207076 PCT