Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0247 ATGGTTGATTTAAACTGGAAATCAAAGATAGTCAATTCCAACATACCCACCAAGTCCTCAAAAATTTCCTTATCCGATACACCCATACCCAAACTACTCCCCTTACCCAATTTCCAACAACCAATTAAAAACGACATCTCTCCTGCGTCGTCTAAGGTTTGTTCTGCATACGACAACTACCTTCGCCTTCCTCAACTTAGAAAGCTTTGGGCCTCCAACGACTTCCCAAACTGGACCAACGAGCCCGTTTTAAAACCAGCCTTTCATTCTCTCGAGATCACGTTCCGGTTCATCTGGACCGTTTTATCTGATCCTAGACCTTACTTGAACCGGCGCGAGTTTACTCGTAGGCTCGAGTCGCTCGCTACCTCTCAGGTTCAGATTATAGCCATGCTATGCGAAGACGAGGAACAAAACTCCGAGCCACGTGGCACTGCACCGGTAATTAACGGAAACAGTTTTGGGGATAGTAGGAGTTACAGCGAAGCTAGTTTTCTTTCAAGGCTTGCCACTTGGCACAAATCTAGGAACGTGGCACAGAGGATTCTCTTCTCCATAGAACGAGAAATGAGTAGGTGTTCATACACGCTTGGGTTGGGAGAAGCGAACTTCAACGGGAAACCGATCCTCCGATATGACGCAGTTTGCAAACCTAATGAGTTACACGCTTTAGAAACGACGTCGTTCGATCACGTAGAGAACTACGAGAACATAACTTTGCAATCGACGCACCAGATATTGGAGTCATGGTCACGCGTCTCGCGCGTGTTGCTTGAAAGAGTAATTGATTCGATCGATTGTAGAAAGTTTGAGGAGGCTTCGATGGATTGTCATGCAGTGGAGCGGATCTGGAAGCTTCTGGCGGAGGTAGAGGATCTTCATTTAATGATAGATCCAGATGATTTTTTGAAATTGAAGAAGGAGCTTGGGATTCGACCATGCGGTGAAACGGTGCCGTTTTGCCTTCGATCGAACGAGCTCGTGGAGATGGCAAATATGTGTAAGGATTTAAGGAAGAAGGTGCCGATGATATTAGAGGTGGAAGTGGACCTGAAGGGTGGGCCAGGGATGGTGGAGGCAGCCATGAAGGTTTACGCGGAGAAAAGGAGTGAGTTCGAGAAGGTGCATGTGCTTCAGGCAATGCAAGCGATTGAAACGGCAATGAAAAGCTTCTTCTACGCGTACAAACAGGTGGTTGCGGTGGTTATGGGGAGCGCGGAGGCTAATGGGAACCGGTTTGACTCGTTGACCCACATTTTCCTCCAACCTACGTATTTCCCCAGCTTAGATGCTGCTAAGACGTTCCTGGGGTATTATTGGGATAACAATAATAACTAA 1338 0.4709 MVDLNWKSKIVNSNIPTKSSKISLSDTPIPKLLPLPNFQQPIKNDISPASSKVCSAYDNYLRLPQLRKLWASNDFPNWTNEPVLKPAFHSLEITFRFIWTVLSDPRPYLNRREFTRRLESLATSQVQIIAMLCEDEEQNSEPRGTAPVINGNSFGDSRSYSEASFLSRLATWHKSRNVAQRILFSIEREMSRCSYTLGLGEANFNGKPILRYDAVCKPNELHALETTSFDHVENYENITLQSTHQILESWSRVSRVLLERVIDSIDCRKFEEASMDCHAVERIWKLLAEVEDLHLMIDPDDFLKLKKELGIRPCGETVPFCLRSNELVEMANMCKDLRKKVPMILEVEVDLKGGPGMVEAAMKVYAEKRSEFEKVHVLQAMQAIETAMKSFFYAYKQVVAVVMGSAEANGNRFDSLTHIFLQPTYFPSLDAAKTFLGYYWDNNNN 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0247 445 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 212 436 IPR037217 GO:0019441|GO:0020037|GO:0046872
Lal6g0247 445 Pfam Hs1pro-1 N-terminus 1 187 IPR009869 GO:0006952
Lal6g0247 445 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 1 445 - -
Lal6g0247 445 Pfam Hs1pro-1 protein C-terminus 190 442 IPR009743 -
Lal6g0247 445 Gene3D - 212 312 - -
Lal6g0247 445 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 445 IPR038759 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0247 Lal-Chr6 1606182 1607519 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0247 - - gmx:100778560 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0247 6 1606182 1607519 Lal6g0247 6 1606182 1607519 ECH
Lal3g0584 3 4415930 4417267 Lal6g0247 6 1606182 1607519 PCT
Lal5g1131 5 14048229 14049584 Lal6g0247 6 1606182 1607519 PCT
Lal6g0247 6 1606182 1607519 Lal3g0584 3 4415930 4417267 PCT
Lal6g0247 6 1606182 1607519 Lal5g1131 5 14048229 14049584 PCT