Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1131 ATGCCAACCTCCAATCCTCTAAAAAACTCTATATCCAATAACCTCTCACTACCTTCTTTACAACAACAACAACAACCCTTCTTCACCAGCCACATCTCCGCCGCATCGCCGCCTCTATGCTCCGCCTACGACCACTACCTCCACCTCCCGGAACTCAGAAAACTCTGGACTTCCAGAAACTTCCCAAATTGGAGCAACGAGCCAGTCCTCAAACCCGCGTTGCAAGCTCTTGAAATCACATTCCGGTTCATGTCAACCGTTTTTTCAGACCCCAGACCGTACGCGAACCGGACCGAACTGAAACGTAGGGTCGAGTCACTCGCCACGTCACAGATCGAAATCATTGCTATGCTTTGCGAAGACGATGAACATGACTCACATACACGTGGCACTGCCCCAACGCTAAACCTTGAGACTCAGCAGAATCTTAACCAGAGAAGAAGCTATAGTGAAGCTAGCTTGCTTCCTCGTCTCGCCACGTGGCATAAATCAAAACCCGCAGCGCAGAGGATCCTTCTCTCTGTCGAATGCGCAATGATGAGGTGTCCTTACACGCTGGGGTTGGGTGAACTAAATCTCGCTATGAAACCAAGTCTCCAATACGACACCGTTTGTAAACCAAACGAGCTTCACAATCACGCTCTCAAATCTAAAACAGAAGAGAGTCTTACGGTGCACGCAACACACCAGATCATGGAGTCATGGATCCAAGCGTCACGGAAGCTTCTAGAAAGAATCAACGAAGCATTAGATAATAGAATATTAGAGAAAGCCACGAGGGATTGTTATGCAGTAGAGAGGATCTGGAAGGTTCTAACGGAAATAGAAGACATGCATGTTGTGATGGACCCTGATGATTTTCTGAAAATAAAAAAAGAGTTAAATTCAGTTAAGGGTGAAACGGTGGCGTTTTGTTTGAGATCGAAAGGGGTAGTTGAAGTAACGAATATGTGTAAGGAATTGAAGCAGAAGGTGCCAGGAATATTGGAAGTGGAAGTGGACCCCAGGGGTGGGCCCGGGGTAATGGAAGCAGCGATGAAAGTGTATGTAGAAAAGGAAAGTGGGTTCGAGAAGGTTCATGTGTTACAAGCGATGCAAGCGATTGAGGTTGCAATGAAGAGATTTTTCTATGGTTATAAACAGGTTTTCGTGGTGGTTATGGGGAGTGCTGAAGCGAGTGGGAACCGAGTTAGTGAAGGGGGTGACTCGTTGAGTCAGATATATATGGAACCTACTTATTTTCCGAGTTTGGATGCGGCTAAGACTTTTCTTGGCTATTATTATGGGGAAAATGATAGTCGTGGTGGTTTGAGAACTTTGAACAGGAATGGGACTGTGGGTGTGATGATAGAATAA 1356 0.4609 MPTSNPLKNSISNNLSLPSLQQQQQPFFTSHISAASPPLCSAYDHYLHLPELRKLWTSRNFPNWSNEPVLKPALQALEITFRFMSTVFSDPRPYANRTELKRRVESLATSQIEIIAMLCEDDEHDSHTRGTAPTLNLETQQNLNQRRSYSEASLLPRLATWHKSKPAAQRILLSVECAMMRCPYTLGLGELNLAMKPSLQYDTVCKPNELHNHALKSKTEESLTVHATHQIMESWIQASRKLLERINEALDNRILEKATRDCYAVERIWKVLTEIEDMHVVMDPDDFLKIKKELNSVKGETVAFCLRSKGVVEVTNMCKELKQKVPGILEVEVDPRGGPGVMEAAMKVYVEKESGFEKVHVLQAMQAIEVAMKRFFYGYKQVFVVVMGSAEASGNRVSEGGDSLSQIYMEPTYFPSLDAAKTFLGYYYGENDSRGGLRTLNRNGTVGVMIE 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1131 451 Gene3D - 201 299 - -
Lal5g1131 451 Pfam Hs1pro-1 N-terminus 7 176 IPR009869 GO:0006952
Lal5g1131 451 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 205 424 IPR037217 GO:0019441|GO:0020037|GO:0046872
Lal5g1131 451 Pfam Hs1pro-1 protein C-terminus 179 428 IPR009743 -
Lal5g1131 451 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 12 432 - -
Lal5g1131 451 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 12 432 IPR038759 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1131 Lal-Chr5 14048229 14049584 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1131 - - gmx:547603 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0584 3 4415930 4417267 Lal5g1131 5 14048229 14049584 LSH
Lal5g1131 5 14048229 14049584 Lal6g0247 6 1606182 1607519 PCT
Lal6g0247 6 1606182 1607519 Lal5g1131 5 14048229 14049584 PCT