Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0240 ATGGGGAGATTGTTTGTGCTTCATCTAGAAGGAAAGATCTATAGCTGCAAACACTGTCGTACCCATCTTGCTCTTTCTGAAGACATCGTTTCCAAGAGGGTGAGCCTCAGTGCAATAGTAAGGTTACTGCTTAGTAACCATAAGGTTATGAGTTCAAATCCTAAAATCATGTTTGCAGGTCTTTCCACTCCAGACATGGGAAAGCTTATCTCTTCAGTAAGGTGTAAGTTATCCTTGAATTTCAGCACCTTGTCGTTGTGTGATTACACCAAAAAAACTGAAACAAACTTTCTCTCATGCGTGAATGTTTCGATGGGAGAAAAGGAGGATAGACAGATGATGACTGGGATGCATACTGTGGTTGACATTTTCTGTGTGGGTTGTGGTTCAATTGTTGGTTGGAAATATGAGTCTGCCCATGAAAAAAGCCAGAAGTACAAGGAAGGAAAATCTGTTCTTGAAAGGTTCAAGTTGTCAGGTCCTGATGGCAGCAATTATTGGGTCAACAGCCATGATTCACATATTGGTGGAAGTGATGCAGATGATGTCTAG 552 0.413 MGRLFVLHLEGKIYSCKHCRTHLALSEDIVSKRVSLSAIVRLLLSNHKVMSSNPKIMFAGLSTPDMGKLISSVRCKLSLNFSTLSLCDYTKKTETNFLSCVNVSMGEKEDRQMMTGMHTVVDIFCVGCGSIVGWKYESAHEKSQKYKEGKSVLERFKLSGPDGSNYWVNSHDSHIGGSDADDV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0240 183 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 157 IPR004910 -
Lal6g0240 183 ProSiteProfiles Yippee domain profile. 68 162 IPR034751 -
Lal6g0240 183 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 35 IPR039058 -
Lal6g0240 183 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 90 183 IPR039058 -
Lal6g0240 183 PANTHER PROTEIN YIPPEE-LIKE 90 183 - -
Lal6g0240 183 PANTHER PROTEIN YIPPEE-LIKE 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0240 Lal-Chr6 1575146 1578137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0240 - - aly:9315911 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0240 6 1575146 1578137 Lal6g0240 6 1575146 1578137 ECH
Lal18g1370 18 16046764 16050371 Lal6g0240 6 1575146 1578137 LSH
Lal22g0229 22 1426667 1429704 Lal6g0240 6 1575146 1578137 LSH
Lal18g1370 18 16046764 16050371 Lal6g0240 6 1575146 1578137 PCT
Lal6g0240 6 1575146 1578137 Lal18g1370 18 16046764 16050371 PCT