Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1370 ATGGGGAGGTTGTTTGTGGTTCATCTAGAAGGGAAGATCTATAGCTGCAAACACTGTCGTACCCATCTTGCTCTTTCTGAAGACATCGTTTCCAAGTGGAAGTCCATTTGGAATTTTGGACCAATTGCTAAGTGCTTCATATCAGGCTACCTTAGGGATGATAAAATGAGGATGTCTTTCCACTCCAGACATGGGAAAGCTTATCTCTTCAATAAGGTTGTGAATGTTTCGCTGGGAGAAAAAGAGGATAGACAGATGATGACCGGGATGCATACTGTGGTTGACATGTTCTGTGTAGGTTGTGGATCAATTGTTGGTTGGAAATATGAAACTGCCCATGAAAAAAGCCAGAAGTACAAGGAAGGGAAATATGTTATTGAAAGGTTCAAGTTGTCAGGCCCTGATGGCAGCAATTACTGGGTCTGTAACCATGAACCACATGTTGGTGGAAGTGATGCAGATGATGTCTAA 471 0.4246 MGRLFVVHLEGKIYSCKHCRTHLALSEDIVSKWKSIWNFGPIAKCFISGYLRDDKMRMSFHSRHGKAYLFNKVVNVSLGEKEDRQMMTGMHTVVDMFCVGCGSIVGWKYETAHEKSQKYKEGKYVIERFKLSGPDGSNYWVCNHEPHVGGSDADDV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1370 156 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 32 IPR039058 -
Lal18g1370 156 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 45 156 IPR039058 -
Lal18g1370 156 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 130 IPR004910 -
Lal18g1370 156 ProSiteProfiles Yippee domain profile. 12 135 IPR034751 -
Lal18g1370 156 PANTHER PROTEIN YIPPEE-LIKE 45 156 - -
Lal18g1370 156 PANTHER PROTEIN YIPPEE-LIKE 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1370 Lal-Chr18 16046764 16050371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1370 - - lang:109361215 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1370 18 16046764 16050371 Lal18g1370 18 16046764 16050371 ECH
Lal18g1370 18 16046764 16050371 Lal22g0229 22 1426667 1429704 LSH
Lal18g1370 18 16046764 16050371 Lal6g0240 6 1575146 1578137 LSH
Lal18g1370 18 16046764 16050371 Lal18g1370 18 16046764 16050371 PCT
Lal18g1370 18 16046764 16050371 Lal22g0229 22 1426667 1429704 PCT
Lal18g1370 18 16046764 16050371 Lal6g0240 6 1575146 1578137 PCT
Lal22g0229 22 1426667 1429704 Lal18g1370 18 16046764 16050371 PCT
Lal6g0240 6 1575146 1578137 Lal18g1370 18 16046764 16050371 PCT